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Graphs are commonly used to characterise interactions between objects of interest. Because they are based on a straightforward formalism, they are used in many scientific fields from computer science to historical sciences. In this paper,…

Machine Learning · Statistics 2015-06-24 Pierre Latouche , Fabrice Rossi

In this paper we generalize and improve the multiscale organization of graphs by introducing a new measure that quantifies the "closeness" between two nodes. The calculation of the measure is linear in the number of edges in the graph and…

Data Structures and Algorithms · Computer Science 2010-04-09 Dorit Ron , Ilya Safro , Achi Brandt

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

As graphical summaries for topological spaces and maps, Reeb graphs are common objects in the computer graphics or topological data analysis literature. Defining good metrics between these objects has become an important question for…

Computational Geometry · Computer Science 2017-03-09 Mathieu Carrière , Steve Oudot

Interactions and relations between objects may be pairwise or higher-order in nature, and so network-valued data are ubiquitous in the real world. The "space of networks", however, has a complex structure that cannot be adequately described…

Metric Geometry · Mathematics 2024-12-09 Stephen Y Zhang , Fangfei Lan , Youjia Zhou , Agnese Barbensi , Michael P H Stumpf , Bei Wang , Tom Needham

Many modern data analysis algorithms either assume that or are considerably more efficient if the distances between the data points satisfy a metric. These algorithms include metric learning, clustering, and dimensionality reduction.…

Data Structures and Algorithms · Computer Science 2018-07-23 Anna C. Gilbert , Rishi Sonthalia

The newly introduced neighborhood matrix extends the power of adjacency and distance matrices to describe the topology of graphs. The adjacency matrix enumerates which pairs of vertices share an edge and it may be summarized by the degree…

General Mathematics · Mathematics 2016-08-09 Jonathan W. Roginski , Ralucca M. Gera , Erik C. Rye

The study of the topological structure of complex networks has fascinated researchers for several decades, and today we have a fairly good understanding of the types and reoccurring characteristics of many different complex networks.…

Social and Information Networks · Computer Science 2014-06-23 Matthieu Roy , Stefan Schmid , Gilles Trédan

We address the problem of merging graph and feature-space information while learning a metric from structured data. Existing algorithms tackle the problem in an asymmetric way, by either extracting vectorized summaries of the graph…

Machine Learning · Computer Science 2020-02-17 Nicolo Colombo

Graphs are fundamental objects that find widespread applications across computer science and beyond. Graph Theory has yielded deep insights about structural properties of various families of graphs, which are leveraged in the design and…

Data Structures and Algorithms · Computer Science 2023-08-30 Rachit Nimavat

Processing large complex networks recently attracted considerable interest. Complex graphs are useful in a wide range of applications from technological networks to biological systems like the human brain. Sometimes these networks are…

Data Structures and Algorithms · Computer Science 2019-12-03 Christian Schulz

This paper proposes a family of graph metrics for measuring distances between graphs of different sizes. The proposed metric family defines a general form of the graph generalised optimal sub-pattern assignment (GOSPA) metric and is also…

Social and Information Networks · Computer Science 2025-06-24 Jinhao Gu , Ángel F. García-Fernández , Robert E. Firth , Lennart Svensson

We demonstrate that a graph-based search algorithm-relying on the construction of an approximate neighborhood graph-can directly work with challenging non-metric and/or non-symmetric distances without resorting to metric-space mapping…

Information Retrieval · Computer Science 2019-10-09 Leonid Boytsov , Eric Nyberg

Graph drawings are commonly used to visualize relational data. User understanding and performance are linked to the quality of such drawings, which is measured by quality metrics. The tacit knowledge in the graph drawing community about…

Computational Geometry · Computer Science 2025-08-22 Simon van Wageningen , Tamara Mchedlidze , Alexandru C. Telea

The problem of measuring similarity of graphs and their nodes is important in a range of practical problems. There is a number of proposed measures, some of them being based on iterative calculation of similarity between two graphs and the…

Artificial Intelligence · Computer Science 2010-09-28 Mladen Nikolic

Graphs drawn in the plane are ubiquitous, arising from data sets through a variety of methods ranging from GIS analysis to image classification to shape analysis. A fundamental problem in this type of data is comparison: given a set of such…

Computational Geometry · Computer Science 2022-10-20 Levent Batakci , Abigail Branson , Bryan Castillo , Candace Todd , Erin Wolf Chambers , Elizabeth Munch

To improve our understanding of connected systems, different tools derived from statistics, signal processing, information theory and statistical physics have been developed in the last decade. Here, we will focus on the graph comparison…

Physics and Society · Physics 2018-04-23 Johann H. Martínez , Mario Chavez

We study the properties of several proximity measures for the vertices of weighted multigraphs and multidigraphs. Unlike the classical distance for the vertices of connected graphs, these proximity measures are applicable to weighted…

Combinatorics · Mathematics 2007-05-23 Pavel Chebotarev , Elena Shamis

Graph neural networks (GNNs) have achieved tremendous success on multiple graph-based learning tasks by fusing network structure and node features. Modern GNN models are built upon iterative aggregation of neighbor's/proximity features by…

Machine Learning · Computer Science 2021-06-15 Susheel Suresh , Vinith Budde , Jennifer Neville , Pan Li , Jianzhu Ma