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In this paper we introduce a diagnostic for measuring the quantum-classical difference for open quantum systems, which is the normalized size of the quantum terms in the Master equation for Wigner function evolution. For a driven Duffing…

Quantum Physics · Physics 2009-04-23 Nathan Wiebe , Parin Sripakdeevong , Arnaldo Gammal , Arjendu K. Pattanayak

We study the effects of fast spatial movement of molecules on the dynamics of chemical species in a spatially heterogeneous chemical reaction network using a compartment model. The reaction networks we consider are either single- or…

Probability · Mathematics 2015-10-27 Peter Pfaffelhuber , Lea Popovic

Finite-size scaling (FSS) for a critical phase transition ($t=0$) states that within a window of size $|t|\sim L^{-1/\nu}$, the scaling behavior of any observable $Q$ in a system of linear size $L$ asymptotically follows a scaling form as…

Statistical Mechanics · Physics 2024-12-10 Ming Li , Sheng Fang , Jingfang Fan , Youjin Deng

The quasi-steady-state approximation (QSSA) is a standard technique for reducing the complexity of chemical reaction networks (CRNs). The validity of any QSSA-based model is restricted to specific parameter regimes. Selecting the…

Dynamical Systems · Mathematics 2026-01-21 Timothy Earl Figueroa Lapuz , Martin Wechselberger

An ubiquitous property of biological sensory systems is adaptation: a step increase in stimulus triggers an initial change in a biochemical or physiological response, followed by a more gradual relaxation toward a basal, pre-stimulus level.…

Systems and Control · Computer Science 2015-06-04 Maja Skataric , Eduardo Sontag

In this document, we deal with the stabilization problem of slow-fast systems (or singularly perturbed Ordinary Differential Equations) at a non-hyperbolic point. The class of systems studied here have the following properties: 1) they have…

Systems and Control · Computer Science 2017-04-26 H. Jardon-Kojakhmetov , Jacquelien M. A. Scherpen , D. del Puerto-Flores

In this paper we return to the problem of reduced-state dynamics in the presence of an interacting environment. The question we investigate is how to appropriately model a particular system evolution given some knowledge of the…

Quantum Physics · Physics 2015-07-02 Eric Chitambar , Ali Abu-Nada , Russell Ceballos , Mark Byrd

In this article we study a small random perturbation of a linear recurrence equation. If all the roots of its corresponding characteristic equation have modulus strictly less than one, the random linear recurrence goes exponentially fast to…

Probability · Mathematics 2023-05-05 Gerardo Barrera , Shuo Liu

Mathematical analysis of mass action models of large complex chemical systems is typically only possible if the models are reduced. The most common reduction technique is based on quasi-steady state assumptions. To increase the accuracy of…

Dynamical Systems · Mathematics 2014-11-04 Tomáš Vejchodský , Radek Erban , Philip K. Maini

We study the dynamical response of a system to a sudden change of the tuning parameter $\lambda$ starting (or ending) at the quantum critical point. In particular we analyze the scaling of the excitation probability, number of excited…

Statistical Mechanics · Physics 2010-01-20 C. De Grandi , V. Gritsev , A. Polkovnikov

Motivated by the recent contribution \cite{BB17} we study the scaling limit behavior of a class of one-dimensional stochastic differential equations which has a unique attracting point subject to a small additional repulsive perturbation.…

Mathematical Physics · Physics 2019-06-26 Martin Kolb , Matthias Liesenfeld

Many important applications in biochemistry, materials science, and catalysis sit squarely at the interface between quantum and statistical mechanics: coherent evolution is interrupted by discrete events, such as binding of a substrate or…

Chemical Physics · Physics 2020-03-06 Jacob R. Lindale , Shannon L. Eriksson , Christian P. N. Tanner , Warren S. Warren

In this article we show that the phase-ordering scaling state for binary fluids is not necessarily unique and that local correlations in the initial conditions can be responsible for selecting the scaling state. We describe a new scaling…

Soft Condensed Matter · Physics 2007-05-23 A. J. Wagner

First order quantum phase transitions (1QPTs) are signaled, in the thermodynamic limit, by discontinuous changes in the ground state properties. These discontinuities affect expectation values of observables, including spatial correlations.…

Quantum Physics · Physics 2018-07-12 A. Yuste , C. Cartwright , G. De Chiara , A. Sanpera

Deterministic rate equations are widely used in the study of stochastic, interacting particles systems. This approach assumes that the inherent noise, associated with the discreteness of the elementary constituents, may be neglected when…

Statistical Mechanics · Physics 2012-01-26 David A. Kessler , Nadav M. Shnerb

We define a subclass of Chemical Reaction Networks called Post-Translational Modification systems. Important biological examples of such systems include MAPK cascades and two-component systems which are well-studied experimentally as well…

Molecular Networks · Quantitative Biology 2011-07-19 Elisenda Feliu , Carsten Wiuf

Two dynamical models that have been proposed to describe transitions between low and high confinement states (L-H transitions) in confined plasmas are analysed using singularity theory and stability theory. It is shown that the…

Mathematical Physics · Physics 2009-10-31 R. Ball , R. L. Dewar

We investigate the stabilizability of linear discrete-time switched systems with singular matrices, focusing on the spectral radius in this context. A new lower bound of the stabilizability radius is proposed, which is applicable to any…

Dynamical Systems · Mathematics 2026-05-29 Carl P. Dettmann , Chenmiao Zhang

Understanding the emergent behavior of chemical reaction networks (CRNs) is a fundamental aspect of biology and its origin from inanimate matter. A closed CRN monotonically tends to thermal equilibrium, but when it is opened to external…

Molecular Networks · Quantitative Biology 2024-05-16 Masanari Shimada , Pegah Behrad , Eric De Giuli

This paper deals with stability of discrete-time switched linear systems whose all subsystems are unstable and the set of admissible switching signals obeys pre-specified restrictions on switches between the subsystems and dwell times on…

Systems and Control · Electrical Eng. & Systems 2021-11-11 Atreyee Kundu
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