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Decision support systems based on clinical notes have the potential to improve patient care by pointing doctors towards overseen risks. Predicting a patient's outcome is an essential part of such systems, for which the use of deep neural…

Computation and Language · Computer Science 2021-12-01 Betty van Aken , Sebastian Herrmann , Alexander Löser

Clinical text provides essential information to estimate the acuity of a patient during hospital stays in addition to structured clinical data. In this study, we explore how clinical text can complement a clinical predictive learning task.…

Nowadays, neural network (NN) and deep learning (DL) techniques are widely adopted in many applications, including recommender systems. Given the sparse and stochastic nature of collaborative filtering (CF) data, recent works have…

Information Retrieval · Computer Science 2024-07-03 Giuseppe Serra , Peter Tino , Zhao Xu , Xin Yao

The Bidirectional Encoder Representations from Transformers (BERT) model has achieved the state-of-the-art performance for many natural language processing (NLP) tasks. Yet, limited research has been contributed to studying its…

Computation and Language · Computer Science 2021-09-23 Zimin Wan , Chenchen Xu , Hanna Suominen

The paper researches the problem of representation learning for electronic health records. We present the patient histories as temporal sequences of diseases for which embeddings are learned in an unsupervised setup with a transformer-based…

Computers and Society · Computer Science 2023-11-08 Pavel Blinov , Vladimir Kokh

Autoencoders have been used for finding interpretable and disentangled features underlying neural network representations in both image and text domains. While the efficacy and pitfalls of such methods are well-studied in vision, there is a…

Machine Learning · Computer Science 2025-02-06 Abhinav Menon , Manish Shrivastava , David Krueger , Ekdeep Singh Lubana

Being able to interpret, or explain, the predictions made by a machine learning model is of fundamental importance. This is especially true when there is interest in deploying data-driven models to make high-stakes decisions, e.g. in…

Machine Learning · Computer Science 2019-10-01 An-phi Nguyen , María Rodríguez Martínez

Learning continuous representations from unlabeled textual data has been increasingly studied for benefiting semi-supervised learning. Although it is relatively easier to interpret discrete representations, due to the difficulty of…

Computation and Language · Computer Science 2020-04-29 Yau-Shian Wang , Hung-Yi Lee , Yun-Nung Chen

Multimodal representations that enable cross-modal retrieval are widely used. However, these often lack interpretability making it difficult to explain the retrieved results. Solutions such as learning sparse disentangled representations…

Information Retrieval · Computer Science 2025-06-25 Prachi J , Sumit Bhatia , Srikanta Bedathur

Clinical notes are an efficient way to record patient information but are notoriously hard to decipher for non-experts. Automatically simplifying medical text can empower patients with valuable information about their health, while saving…

Multimodal clinical records contain structured measurements and clinical notes recorded over time, offering rich temporal information about the evolution of patient health. Yet these observations are sparse, and whether they are recorded…

Machine Learning · Computer Science 2026-04-24 Zihan Liang , Ziwen Pan , Ruoxuan Xiong

EEG foundation models achieve state-of-the-art clinical performance, yet the internal computations driving their predictions remain opaque: a barrier to clinical trust. We apply TopK Sparse Autoencoders (SAEs) across three architecturally…

Leveraging knowledge from electronic health records (EHRs) to predict a patient's condition is essential to the effective delivery of appropriate care. Clinical notes of patient EHRs contain valuable information from healthcare…

Computation and Language · Computer Science 2023-05-18 Nayeon Kim , Yinhua Piao , Sun Kim

We examine two fundamental tasks associated with graph representation learning: link prediction and node classification. We present a new autoencoder architecture capable of learning a joint representation of local graph structure and…

Machine Learning · Computer Science 2018-11-08 Phi Vu Tran

Twitter has been a prominent social media platform for mining population-level health data and accurate clustering of health-related tweets into topics is important for extracting relevant health insights. In this work, we propose deep…

Computation and Language · Computer Science 2019-01-03 Oguzhan Gencoglu

Understanding how information is represented in neural networks is a fundamental challenge in both neuroscience and artificial intelligence. Despite their nonlinear architectures, recent evidence suggests that neural networks encode…

Machine Learning · Computer Science 2025-03-04 David Klindt , Charles O'Neill , Patrik Reizinger , Harald Maurer , Nina Miolane

Multimodal Language Analysis is a demanding area of research, since it is associated with two requirements: combining different modalities and capturing temporal information. During the last years, several works have been proposed in the…

Computation and Language · Computer Science 2022-01-10 Panagiotis Koromilas , Theodoros Giannakopoulos

Most pretrained language models rely on subword tokenization, which processes text as a sequence of subword tokens. However, different granularities of text, such as characters, subwords, and words, can contain different kinds of…

Computation and Language · Computer Science 2024-04-09 Yilin Wang , Xinyi Hu , Matthew R. Gormley

Generative concept representations have three major advantages over discriminative ones: they can represent uncertainty, they support integration of learning and reasoning, and they are good for unsupervised and semi-supervised learning. We…

Machine Learning · Computer Science 2018-11-19 Daniel T. Chang

Distributed representations of text can be used as features when training a statistical classifier. These representations may be created as a composition of word vectors or as context-based sentence vectors. We compare the two kinds of…

Computation and Language · Computer Science 2019-06-14 Aditya Joshi , Sarvnaz Karimi , Ross Sparks , Cecile Paris , C Raina MacIntyre