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Dynamic programming (DP) based algorithms are essential yet compute-intensive parts of numerous bioinformatics pipelines, which typically involve populating a 2-D scoring matrix based on a recursive formula, optionally followed by a…

Hardware Architecture · Computer Science 2024-11-07 Yingqi Cao , Anshu Gupta , Jason Liang , Yatish Turakhia

CPU-FPGA heterogeneous architectures are attracting ever-increasing attention in an attempt to advance computational capabilities and energy efficiency in today's datacenters. These architectures provide programmers with the ability to…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-09-24 Jason Cong , Peng Wei , Cody Hao Yu , Peng Zhang

High-Level Synthesis has introduced reconfigurable logic to a new world -- that of software development. The newest wave of HLS tools has been successful, and the future looks bright. But is HLS the end-all-be-all to FPGA acceleration? Is…

Hardware Architecture · Computer Science 2021-04-07 Pedro Filipe Silva , João Bispo , Nuno Paulino

Field-Programmable Gate Arrays (FPGAs) are widely used in the central signal processing design of the Square Kilometre Array (SKA) as acceleration hardware. The frequency domain acceleration search (FDAS) module is an important part of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-02 Haomiao Wang , Prabu Thiagaraj , Oliver Sinnen

Customized accelerators have revolutionized modern computing by delivering substantial gains in energy efficiency and performance through hardware specialization. Field-Programmable Gate Arrays (FPGAs) play a crucial role in this paradigm,…

Hardware Architecture · Computer Science 2025-09-25 Stéphane Pouget , Michael Lo , Louis-Noël Pouchet , Jason Cong

High-level synthesis (HLS) tools have brought FPGA development into the mainstream, by allowing programmers to design architectures using familiar languages such as C, C++, and OpenCL. While the move to these languages has brought…

Hardware Architecture · Computer Science 2019-10-11 Johannes de Fine Licht , Torsten Hoefler

Recent hardware acceleration advances have enabled powerful specialized accelerators for finite element computations, spiking neural network inference, and sparse tensor operations. However, existing approaches face fundamental limitations:…

Hardware Architecture · Computer Science 2026-01-09 Chuanzhen Wang , Leo Zhang , Eric Liu

High Performance Computing (HPC) platforms allow scientists to model computationally intensive algorithms. HPC clusters increasingly use General-Purpose Graphics Processing Units (GPGPUs) as accelerators; FPGAs provide an attractive…

Hardware Architecture · Computer Science 2015-04-20 Syed Waqar Nabi , Saji N. Hameed , Wim Vanderbauwhede

Offloading compute intensive nested loops to execute on FPGA accelerators have been demonstrated by numerous researchers as an effective performance enhancement technique across numerous application domains. To construct such accelerators…

Hardware Architecture · Computer Science 2015-09-02 Cheng Liu , Ho-Cheung Ng , Hayden Kwok-Hay So

Reconfigurable architectures like Field Programmable Gate Arrays (FPGAs) have been used for accelerating computations in several domains because of their unique combination of flexibility, performance, and power efficiency. However, FPGAs…

Hardware Architecture · Computer Science 2023-04-26 Murat Isik , Kayode Inadagbo , Hakan Aktas

Hardware-based acceleration is an extensive attempt to facilitate many computationally-intensive mathematics operations. This paper proposes an FPGA-based architecture to accelerate the convolution operation - a complex and expensive…

Hardware Architecture · Computer Science 2023-02-28 Trung Dinh Pham , Bao Gia Bach , Lam Trinh Luu , Minh Dinh Nguyen , Hai Duc Pham , Khoa Bui Anh , Xuan Quang Nguyen , Cuong Pham Quoc

FPGAs are increasingly adopted in datacenter environments for their reconfigurability and energy efficiency. High-Level Synthesis (HLS) tools have eased FPGA programming by raising the abstraction level from RTL to untimed C/C++, yet…

Machine Learning · Computer Science 2025-05-01 Neha Prakriya , Zijian Ding , Yizhou Sun , Jason Cong

Recently, the field of deep learning has received great attention by the scientific community and it is used to provide improved solutions to many computer vision problems. Convolutional neural networks (CNNs) have been successfully used to…

Computer Vision and Pattern Recognition · Computer Science 2019-03-26 Panagiotis G. Mousouliotis , Loukas P. Petrou

Field Programmable Gate Arrays (FPGAs) have the potential to accelerate specific HPC codes. However even with the advent of High Level Synthesis (HLS), which enables FPGA programmers to write code in C or C++, programming such devices still…

Programming Languages · Computer Science 2021-04-13 Nick Brown

With the emerging big data applications of Machine Learning, Speech Recognition, Artificial Intelligence, and DNA Sequencing in recent years, computer architecture research communities are facing the explosive scale of various data…

Hardware Architecture · Computer Science 2017-12-14 Chao Wang , Wenqi Lou , Lei Gong , Lihui Jin , Luchao Tan , Yahui Hu , Xi Li , Xuehai Zhou

Field-Programmable Gate Array (FPGA)-based Software-Defined Radio (SDR) is well-suited for experimenting with advanced wireless communication systems, as it allows to alter the architecture promptly while obtaining high performance.…

Hardware Architecture · Computer Science 2023-05-24 Thijs Havinga , Xianjun Jiao , Wei Liu , Ingrid Moerman

High-level synthesis (HLS) has freed the computer architects from developing their designs in a very low-level language and needing to exactly specify how the data should be transferred in register-level. With the help of HLS, the hardware…

Hardware Architecture · Computer Science 2021-11-23 Atefeh Sohrabizadeh , Yunsheng Bai , Yizhou Sun , Jason Cong

In recent years, hardware accelerators based on field-programmable gate arrays (FPGAs) have been widely adopted, thanks to FPGAs' extraordinary flexibility. However, with the high flexibility comes the difficulty in design and optimization.…

Hardware Architecture · Computer Science 2022-07-19 Mang Yu , Sitao Huang , Deming Chen

In recent years the use of FPGAs to accelerate scientific applications has grown, with numerous applications demonstrating the benefit of FPGAs for high performance workloads. However, whilst High Level Synthesis (HLS) has significantly…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-28 Gabriel Rodriguez-Canal , Nick Brown , Tim Dykes , Jessica R. Jones , Utz-Uwe Haus

C/C++/OpenCL-based high-level synthesis (HLS) becomes more and more popular for field-programmable gate array (FPGA) accelerators in many application domains in recent years, thanks to its competitive quality of results (QoR) and short…

Hardware Architecture · Computer Science 2021-05-07 Yuze Chi , Licheng Guo , Jason Lau , Young-kyu Choi , Jie Wang , Jason Cong