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Measuring similarity between complex objects is a fundamental task in many scientific fields. When objects are represented as graphs, graph similarity/distance measures offer a powerful framework for quantifying structural resemblance.…

Combinatorics · Mathematics 2025-09-30 Matthias Dehmer , Izudin Redžepović , Niko Tratnik , Petra Žigert Pleteršek

Comparison of graph structure is a ubiquitous task in data analysis and machine learning, with diverse applications in fields such as neuroscience, cyber security, social network analysis, and bioinformatics, among others. Discovery and…

Applications · Statistics 2023-01-11 Peter Wills , Francois G. Meyer

We analytically study proximity and distance properties of various kernels and similarity measures on graphs. This helps to understand the mathematical nature of such measures and can potentially be useful for recommending the adoption of…

Combinatorics · Mathematics 2018-08-17 Konstantin Avrachenkov , Pavel Chebotarev , Dmytro Rubanov

We give an overview of different approaches to measuring the similarity of, or the distance between, two graphs, highlighting connections between these approaches. We also discuss the complexity of computing the distances.

Discrete Mathematics · Computer Science 2025-03-19 Martin Grohe

This article introduces a concept and measure of graph compartmentalization. This new measure allows for principled comparison between graphs of arbitrary structure, unlike existing measures such as graph modularity. The proposed measure is…

Social and Information Networks · Computer Science 2014-08-29 Matthew J. Denny

Graph-based clustering methods have demonstrated the effectiveness in various applications. Generally, existing graph-based clustering methods first construct a graph to represent the input data and then partition it to generate the…

Machine Learning · Computer Science 2019-12-17 Yuheng Jia , Hui Liu , Junhui Hou , Sam Kwong

Graph clustering has been studied extensively on both plain graphs and attributed graphs. However, all these methods need to partition the whole graph to find cluster structures. Sometimes, based on domain knowledge, people may have…

Machine Learning · Computer Science 2020-03-26 Wei Ye , Dominik Mautz , Christian Boehm , Ambuj Singh , Claudia Plant

A wide range of tasks in network analysis, such as clustering network populations or identifying anomalies in temporal graph streams, require a measure of the similarity between two graphs. To provide a meaningful data summary for…

Physics and Society · Physics 2024-10-15 Helcio Felippe , Federico Battiston , Alec Kirkley

In this article, we revisit and expand our prior work on graph similarity. As with our earlier work, we focus on a view of similarity which does not require node correspondence between graphs under comparison. Our work is suited to the…

Discrete Mathematics · Computer Science 2025-12-10 Pierre Miasnikof , Alexander Y. Shetopaloff

Many community detection algorithms require the introduction of a measure on the set of nodes. Previously, a lot of efforts have been made to find the top-performing measures. In most cases, experiments were conducted on several datasets or…

Social and Information Networks · Computer Science 2021-11-03 Rinat Aynulin

Graph structure patterns are widely used to model different area data recently. How to detect anomalous graph information on these graph data has become a popular research problem. The objective of this research is centered on the…

Machine Learning · Computer Science 2023-07-26 Fu Lin , Haonan Gong , Mingkang Li , Zitong Wang , Yue Zhang , Xuexiong Luo

Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the…

Machine Learning · Computer Science 2019-05-22 Zhao Kang , Honghui Xu , Boyu Wang , Hongyuan Zhu , Zenglin Xu

Clustering evaluation measures are frequently used to evaluate the performance of algorithms. However, most measures are not properly normalized and ignore some information in the inherent structure of clusterings. We model the relation…

Machine Learning · Computer Science 2012-09-05 Qiaoliang Xiang , Qi Mao , Kian Ming Chai , Hai Leong Chieu , Ivor Tsang , Zhendong Zhao

Graph matching is the process of computing the similarity between two graphs. Depending on the requirement, it can be exact or inexact. Exact graph matching requires a strict correspondence between nodes of two graphs, whereas inexact…

Social and Information Networks · Computer Science 2022-01-13 Shri Prakash Dwivedi

With the advent of the big data, graph are processed in an iterative manner, which incrementally described in the form of graph in big data applications. Most currently, graph processing methods treat the underlying map data as black boxes.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-05 Beibei Si

The study of the topological structure of complex networks has fascinated researchers for several decades, and today we have a fairly good understanding of the types and reoccurring characteristics of many different complex networks.…

Social and Information Networks · Computer Science 2014-06-23 Matthieu Roy , Stefan Schmid , Gilles Trédan

The problem of measuring similarity of graphs and their nodes is important in a range of practical problems. There is a number of proposed measures, some of them being based on iterative calculation of similarity between two graphs and the…

Artificial Intelligence · Computer Science 2010-09-28 Mladen Nikolic

Merge trees, a type of topological descriptor, serve to identify and summarize the topological characteristics associated with scalar fields. They present a great potential for the analysis and visualization of time-varying data. First,…

Human-Computer Interaction · Computer Science 2021-08-02 Lin Yan , Talha Bin Masood , Farhan Rasheed , Ingrid Hotz , Bei Wang

Quantifying the similarity between two graphs is a fundamental algorithmic problem at the heart of many data analysis tasks for graph-based data. In this paper, we study the computational complexity of a family of similarity measures based…

Discrete Mathematics · Computer Science 2022-07-04 Timo Gervens , Martin Grohe

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang
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