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One basic requirement of many studies is the necessity of classifying data. Clustering is a proposed method for summarizing networks. Clustering methods can be divided into two categories named model-based approaches and algorithmic…

Machine Learning · Computer Science 2013-02-19 Raheleh Namayandeh , Farzad Didehvar , Zahra Shojaei

In this paper we consider discrete robot path planning problems on metric graphs. We propose a clustering method, Gamma-Clustering for the planning graph that significantly reduces the number of feasible solutions, yet retains a solution…

Robotics · Computer Science 2017-03-02 Frank Imeson , Stephen L. Smith

We introduce the ParClusterers Benchmark Suite (PCBS) -- a collection of highly scalable parallel graph clustering algorithms and benchmarking tools that streamline comparing different graph clustering algorithms and implementations. The…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-18 Shangdi Yu , Jessica Shi , Jamison Meindl , David Eisenstat , Xiaoen Ju , Sasan Tavakkol , Laxman Dhulipala , Jakub Łącki , Vahab Mirrokni , Julian Shun

Subspace clustering refers to the problem of clustering high-dimensional data points into a union of low-dimensional linear subspaces, where the number of subspaces, their dimensions and orientations are all unknown. In this paper, we…

Machine Learning · Statistics 2014-03-17 Reinhard Heckel , Eirikur Agustsson , Helmut Bölcskei

Clustering is the problem of separating a set of objects into groups (called clusters) so that objects within the same cluster are more similar to each other than to those in different clusters. Spectral clustering is a now well-known…

Machine Learning · Computer Science 2012-11-16 B. Cung , T. Jin , J. Ramirez , A. Thompson , C. Boutsidis , D. Needell

Samples from intimate (non-linear) mixtures are generally modeled as being drawn from a smooth manifold. Scenarios where the data contains multiple intimate mixtures with some constituent materials in common can be thought of as manifolds…

Computer Vision and Pattern Recognition · Computer Science 2017-08-15 Arun M. Saranathan , Mario Parente

Clustering is a technique for the analysis of datasets obtained by empirical studies in several disciplines with a major application for biomedical research. Essentially, clustering algorithms are executed by machines aiming at finding…

Quantitative Methods · Quantitative Biology 2024-09-30 Diego Ulisse Pizzagalli , Santiago Fernandez Gonzalez , Rolf Krause

Cluster analysis which focuses on the grouping and categorization of similar elements is widely used in various fields of research. Inspired by the phenomenon of atomic fission, a novel density-based clustering algorithm is proposed in this…

Machine Learning · Computer Science 2020-04-28 Shizhan Lu

This paper presents a new, parallel implementation of clustering and demonstrates its utility in greatly speeding up the process of identifying homologous proteins. Clustering is a technique to reduce the number of comparison needed to find…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-29 Stuart Byma , Akash Dhasade , Adrian Altenhoff , Christophe Dessimoz , James R. Larus

We outline a novel clustering scheme for simplicial complexes that produces clusters of simplices in a way that is sensitive to the homology of the complex. The method is inspired by, and can be seen as a higher-dimensional version of,…

Machine Learning · Computer Science 2020-06-23 Stefania Ebli , Gard Spreemann

This paper investigates the computational and statistical limits in clustering matrix-valued observations. We propose a low-rank mixture model (LrMM), adapted from the classical Gaussian mixture model (GMM) to treat matrix-valued…

Statistics Theory · Mathematics 2023-06-08 Zhongyuan Lyu , Dong Xia

Biclustering is a class of techniques that simultaneously clusters the rows and columns of a matrix to sort heterogeneous data into homogeneous blocks. Although many algorithms have been proposed to find biclusters, existing methods suffer…

Machine Learning · Statistics 2020-02-11 Michelle N. Ngo , Dustin S. Pluta , Alexander N. Ngo , Babak Shahbaba

In many statistical linear inverse problems, one needs to recover classes of similar curves from their noisy images under an operator that does not have a bounded inverse. Problems of this kind appear in many areas of application.…

Statistics Theory · Mathematics 2020-03-24 Rasika Rajapakshage , Marianna Pensky

We consider the problem of clustering mixtures of mean-separated Gaussians in high dimensions. We are given samples from a mixture of $k$ identity covariance Gaussians, so that the minimum pairwise distance between any two pairs of means is…

Data Structures and Algorithms · Computer Science 2021-12-02 Jerry Li , Allen Liu

Clustering points in a vector space or nodes in a graph is a ubiquitous primitive in statistical data analysis, and it is commonly used for exploratory data analysis. In practice, it is often of interest to "refine" or "improve" a given…

Machine Learning · Computer Science 2022-02-03 K. Fountoulakis , M. Liu , D. F. Gleich , M. W. Mahoney

Clustering large spatial databases is an important problem, which tries to find the densely populated regions in a spatial area to be used in data mining, knowledge discovery, or efficient information retrieval. However most algorithms have…

Databases · Computer Science 2009-09-25 Mohamed A. El-Zawawy , Mohamed E. El-Sharkawi

Data clustering is an approach to seek for structure in sets of complex data, i.e., sets of "objects". The main objective is to identify groups of objects which are similar to each other, e.g., for classification. Here, an introduction to…

Data Analysis, Statistics and Probability · Physics 2016-02-17 Alexander K. Hartmann

The clustering problem, in its many variants, has numerous applications in operations research and computer science (e.g., in applications in bioinformatics, image processing, social network analysis, etc.). As sizes of data sets have grown…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-24 Sayan Bandyapadhyay , Tanmay Inamdar , Shreyas Pai , Sriram V. Pemmaraju

Several clustering frameworks with interactive (semi-supervised) queries have been studied in the past. Recently, clustering with same-cluster queries has become popular. An algorithm in this setting has access to an oracle with full…

Data Structures and Algorithms · Computer Science 2019-08-15 Barna Saha , Sanjay Subramanian

We study statistical and computational limits of clustering when the means of the centres are sparse and their dimension is possibly much larger than the sample size. Our theoretical analysis focuses on the model $X_i = z_i \theta +…

Statistics Theory · Mathematics 2021-03-23 Matthias Löffler , Alexander S. Wein , Afonso S. Bandeira