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Latent variable models such as the Variational Auto-Encoder (VAE) have become a go-to tool for analyzing biological data, especially in the field of single-cell genomics. One remaining challenge is the interpretability of latent variables…

Genomics · Quantitative Biology 2023-02-20 Romain Lopez , Nataša Tagasovska , Stephen Ra , Kyunghyn Cho , Jonathan K. Pritchard , Aviv Regev

Accurately predicting counterfactual user feedback is essential for building effective recommender systems. However, latent confounding bias can obscure the true causal relationship between user feedback and item exposure, ultimately…

Information Retrieval · Computer Science 2025-05-23 Jianfeng Deng , Qingfeng Chen , Debo Cheng , Jiuyong Li , Lin Liu , Shichao Zhang

Learning useful representations of complex data has been the subject of extensive research for many years. With the diffusion of Deep Neural Networks, Variational Autoencoders have gained lots of attention since they provide an explicit…

Machine Learning · Computer Science 2020-09-15 Marco Maggipinto , Matteo Terzi , Gian Antonio Susto

Variational autoencoders (VAE) are directed generative models that learn factorial latent variables. As noted by Burda et al. (2015), these models exhibit the problem of factor over-pruning where a significant number of stochastic factors…

Machine Learning · Computer Science 2017-08-08 Serena Yeung , Anitha Kannan , Yann Dauphin , Li Fei-Fei

Diffusion models may be viewed as hierarchical variational autoencoders (VAEs) with two improvements: parameter sharing for the conditional distributions in the generative process and efficient computation of the loss as independent terms…

Machine Learning · Computer Science 2025-10-20 Beatrix M. G. Nielsen , Anders Christensen , Andrea Dittadi , Ole Winther

Variational autoencoders (VAEs) are powerful generative modelling methods, however they suffer from blurry generated samples and reconstructions compared to the images they have been trained on. Significant research effort has been spent to…

Computer Vision and Pattern Recognition · Computer Science 2023-04-13 Gustav Bredell , Kyriakos Flouris , Krishna Chaitanya , Ertunc Erdil , Ender Konukoglu

The variational autoencoder (VAE; Kingma, Welling (2014)) is a recently proposed generative model pairing a top-down generative network with a bottom-up recognition network which approximates posterior inference. It typically makes strong…

Machine Learning · Computer Science 2016-11-08 Yuri Burda , Roger Grosse , Ruslan Salakhutdinov

The importance of Variational Autoencoders reaches far beyond standalone generative models -- the approach is also used for learning latent representations and can be generalized to semi-supervised learning. This requires a thorough…

Machine Learning · Computer Science 2022-04-12 Alexander Shekhovtsov , Dmitrij Schlesinger , Boris Flach

After deep generative models were successfully applied to image generation tasks, learning disentangled latent variables of data has become a crucial part of deep generative model research. Many models have been proposed to learn an…

Machine Learning · Computer Science 2019-07-08 Sangchul Hahn , Heeyoul Choi

Identifiability, or recovery of the true latent representations from which the observed data originates, is de facto a fundamental goal of representation learning. Yet, most deep generative models do not address the question of…

Machine Learning · Computer Science 2020-04-28 Shen Li , Bryan Hooi , Gim Hee Lee

There has been a longstanding belief that generation can facilitate a true understanding of visual data. In line with this, we revisit generatively pre-training visual representations in light of recent interest in denoising diffusion…

Computer Vision and Pattern Recognition · Computer Science 2023-04-07 Chen Wei , Karttikeya Mangalam , Po-Yao Huang , Yanghao Li , Haoqi Fan , Hu Xu , Huiyu Wang , Cihang Xie , Alan Yuille , Christoph Feichtenhofer

Variational Autoencoders and their many variants have displayed impressive ability to perform dimensionality reduction, often achieving state-of-the-art performance. Many current methods however, struggle to learn good representations in…

Machine Learning · Computer Science 2023-06-28 Navindu Leelarathna , Andrei Margeloiu , Mateja Jamnik , Nikola Simidjievski

Variational auto-encoders (VAEs) are an influential and generally-used class of likelihood-based generative models in unsupervised learning. The likelihood-based generative models have been reported to be highly robust to the…

Machine Learning · Computer Science 2020-10-06 Xuming Ran , Mingkun Xu , Qi Xu , Huihui Zhou , Quanying Liu

Variational Autoencoders (VAEs) have experienced recent success as data-generating models by using simple architectures that do not require significant fine-tuning of hyperparameters. However, VAEs are known to suffer from…

Machine Learning · Statistics 2020-07-22 Wei Cheng , Gregory Darnell , Sohini Ramachandran , Lorin Crawford

Devising deep latent variable models for multi-modal data has been a long-standing theme in machine learning research. Multi-modal Variational Autoencoders (VAEs) have been a popular generative model class that learns latent representations…

Machine Learning · Statistics 2024-09-25 Marcel Hirt , Domenico Campolo , Victoria Leong , Juan-Pablo Ortega

The problem of fair classification can be mollified if we develop a method to remove the embedded sensitive information from the classification features. This line of separating the sensitive information is developed through the causal…

Machine Learning · Computer Science 2020-12-10 Hyemi Kim , Seungjae Shin , JoonHo Jang , Kyungwoo Song , Weonyoung Joo , Wanmo Kang , Il-Chul Moon

Learning robust representations of authorial style is crucial for authorship attribution and AI-generated text detection. However, existing methods often struggle with content-style entanglement, where models learn spurious correlations…

Computation and Language · Computer Science 2026-04-24 Hieu Man , Van-Cuong Pham , Nghia Trung Ngo , Franck Dernoncourt , Thien Huu Nguyen

We propose a multi-layer variational autoencoder method, we call HR-VQVAE, that learns hierarchical discrete representations of the data. By utilizing a novel objective function, each layer in HR-VQVAE learns a discrete representation of…

Computer Vision and Pattern Recognition · Computer Science 2022-08-10 Mohammad Adiban , Kalin Stefanov , Sabato Marco Siniscalchi , Giampiero Salvi

Optimal computations under uncertainty require an adequate probabilistic representation about beliefs. Deep generative models, and specifically Variational Autoencoders (VAEs), have the potential to meet this demand by building latent…

The variational auto-encoder (VAE) is a popular method for learning a generative model and embeddings of the data. Many real datasets are hierarchically structured. However, traditional VAEs map data in a Euclidean latent space which cannot…

Machine Learning · Statistics 2019-11-27 Emile Mathieu , Charline Le Lan , Chris J. Maddison , Ryota Tomioka , Yee Whye Teh
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