Related papers: Hardness and algorithmic results for the approxima…
Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…
Many consensus string problems are based on Hamming distance. We replace Hamming distance by the more flexible (e.g., easily coping with different input string lengths) dynamic time warping distance, best known from applications in time…
We consider a variant of the set covering problem with uncertain parameters, which we refer to as the chance-constrained set multicover problem (CC-SMCP). In this problem, we assume that there is uncertainty regarding whether a selected set…
Given a simple polygon $\cal P$, in the Art Gallery problem the goal is to find the minimum number of guards needed to cover the entire $\cal P$, where a guard is a point and can see another point $q$ when $\overline{pq}$ does not cross the…
Fault-tolerant quantum computing relies on Quantum Error Correction, which encodes logical qubits into data and parity qubits. Error decoding is the process of translating the measured parity bits into types and locations of errors. To…
In this paper, we study the hardness of decoding a random code endowed with the cover metric. As the cover metric lies in between the Hamming and rank metric, it presents itself as a promising candidate for code-based cryptography. We give…
We give simple deterministic reductions demonstrating the NP-hardness of approximating the nearest codeword problem and minimum distance problem within arbitrary constant factors (and almost-polynomial factors assuming NP cannot be solved…
Covers are a kind of quasiperiodicity in strings. A string $C$ is a cover of another string $T$ if any position of $T$ is inside some occurrence of $C$ in $T$. The shortest and longest cover arrays of $T$ have the lengths of the shortest…
We present a new general method for performing basic arithmetic in the finite field~$\mathbb{F}_p$ for any prime $p>2$ by using traditional binary operations over~$\mathbb{F}_2$. Our new approach is efficient and competitive with current…
The problem of matching a query string to a directed graph, whose vertices are labeled by strings, has application in different fields, from data mining to computational biology. Several variants of the problem have been considered,…
We consider the classic Set Cover problem in the data stream model. For $n$ elements and $m$ sets ($m\geq n$) we give a $O(1/\delta)$-pass algorithm with a strongly sub-linear $\tilde{O}(mn^{\delta})$ space and logarithmic approximation…
The Capacitated Sum of Radii problem involves partitioning a set of points $P$, where each point $p\in P$ has capacity $U_p$, into $k$ clusters that minimize the sum of cluster radii, such that the number of points in the cluster centered…
The standard LP relaxation of the asymmetric traveling salesman problem has been conjectured to have a constant integrality gap in the metric case. We prove this conjecture when restricted to shortest path metrics of node-weighted digraphs.…
We study the Closest Pair Problem in Hamming metric, which asks to find the pair with the smallest Hamming distance in a collection of binary vectors. We give a new randomized algorithm for the problem on uniformly random input…
We study optimization problems that are neither approximable in polynomial time (at least with a constant factor) nor fixed parameter tractable, under widely believed complexity assumptions. Specifically, we focus on Maximum Independent…
Probabilistic relational models such as parametric factor graphs enable efficient (lifted) inference by exploiting the indistinguishability of objects. In lifted inference, a representative of indistinguishable objects is used for…
We give an $\alpha(1+\epsilon)$-approximation algorithm for solving covering LPs, assuming the presence of a $(1/\alpha)$-approximation algorithm for a certain optimization problem. Our algorithm is based on a simple modification of the…
Approximate subgraph matching (ASM) is a task that determines the approximate presence of a given query graph in a large target graph. Being an NP-hard problem, ASM is critical in graph analysis with a myriad of applications ranging from…
This paper introduces the Simultaneous assignment problem. Let us given a graph with a weight and a capacity function on its edges, and a set of its subgraphs along with a degree upper bound function for each of them. We are also given a…
Point pattern matching problems are of fundamental importance in various areas including computer vision and structural bioinformatics. In this paper, we study one of the more general problems, known as LCP (largest common point set…