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A common problem in phylogenetics is to try to infer a species phylogeny from gene trees. We consider different variants of this problem. The first variant, called Unrestricted Minimal Episodes Inference, aims at inferring a species tree…

Populations and Evolution · Quantitative Biology 2019-08-12 Leo van Iersel , Remie Janssen , Mark Jones , Yukihiro Murakami , Norbert Zeh

A syntactical proof is given that all functions definable in a certain affine linear typed lambda-calculus with iteration in all types are polynomial time computable. The proof provides explicit polynomial bounds that can easily be…

Logic in Computer Science · Computer Science 2007-05-23 Klaus Aehlig , Helmut Schwichtenberg

We give necessary and sufficient conditions for a sequence to be exactly realizable as the sequence of numbers of periodic points in a dynamical system. Using these conditions, we show that no non-constant polynomial is realizable, and give…

Dynamical Systems · Mathematics 2007-05-23 Yash Puri , Thomas Ward

We show that the error of iteratively magnitude-pruned networks empirically follows a scaling law with interpretable coefficients that depend on the architecture and task. We functionally approximate the error of the pruned networks,…

Machine Learning · Computer Science 2021-07-06 Jonathan S. Rosenfeld , Jonathan Frankle , Michael Carbin , Nir Shavit

Recently, small models with latent recursion have obtained promising results on complex reasoning tasks. These results are typically explained by the theory that such recursion increases a networks depth, allowing it to compactly emulate…

Computation and Language · Computer Science 2026-02-06 Arip Asadulaev , Rayan Banerjee , Fakhri Karray , Martin Takac

In this article, we discuss the optimal allocation problem in an experiment when a regression model is used for statistical analysis. Monotonic convergence for a general class of multiplicative algorithms for $D$-optimality has been…

Computation · Statistics 2013-10-28 Wei Gao , Ping Shing Chan , Hon Keung Tony Ng , Xiaolei Lu

Learning rate schedules used in practice bear little resemblance to those recommended by theory. We close much of this theory/practice gap, and as a consequence are able to derive new problem-adaptive learning rate schedules. Our main…

Machine Learning · Computer Science 2024-10-31 Aaron Defazio , Ashok Cutkosky , Harsh Mehta , Konstantin Mishchenko

Reducing the conditions under which a given set satisfies the stipulations of the subset sum proposition to a set of linear relationships, the question of whether a set satisfies subset sum may be answered in a polynomial number of steps by…

Data Structures and Algorithms · Computer Science 2017-05-16 Aubrey Alston

Linear recurrent sequences are those whose elements are defined as linear combinations of preceding elements, and finding recurrence relations is a fundamental problem in computer algebra. In this paper, we focus on sequences whose elements…

Symbolic Computation · Computer Science 2021-06-10 Seung Gyu Hyun , Vincent Neiger , Éric Schost

We present methods for online linear optimization that take advantage of benign (as opposed to worst-case) sequences. Specifically if the sequence encountered by the learner is described well by a known "predictable process", the algorithms…

Machine Learning · Statistics 2014-05-27 Alexander Rakhlin , Karthik Sridharan

Decision trees (DTs) embody interpretable classifiers. DTs have been advocated for deployment in high-risk applications, but also for explaining other complex classifiers. Nevertheless, recent work has demonstrated that predictions in DTs…

Artificial Intelligence · Computer Science 2022-05-20 Yacine Izza , Alexey Ignatiev , Nina Narodytska , Martin C. Cooper , Joao Marques-Silva

We consider linear recurrent neural networks, which have become a key building block of sequence modeling due to their ability for stable and effective long-range modeling. In this paper, we aim at characterizing this ability on a simple…

Machine Learning · Computer Science 2025-02-14 Alexandre François , Antonio Orvieto , Francis Bach

We analyze the convergence of (stochastic) gradient descent algorithm for learning a convolutional filter with Rectified Linear Unit (ReLU) activation function. Our analysis does not rely on any specific form of the input distribution and…

Machine Learning · Computer Science 2018-03-01 Simon S. Du , Jason D. Lee , Yuandong Tian

Large reasoning models achieve strong performance on complex tasks by generating extended chains of thought, but they often "overthink": continuing to reason long after they have enough information to answer correctly. This wastes…

Computation and Language · Computer Science 2025-12-08 Ömer Faruk Akgül , Yusuf Hakan Kalaycı , Rajgopal Kannan , Willie Neiswanger , Viktor Prasanna

We discuss methods for visualizing neural network decision boundaries and decision regions. We use these visualizations to investigate issues related to reproducibility and generalization in neural network training. We observe that changes…

We provide a detailed study on the implicit bias of gradient descent when optimizing loss functions with strictly monotone tails, such as the logistic loss, over separable datasets. We look at two basic questions: (a) what are the…

In recent years, functional linear models have attracted growing attention in statistics and machine learning, with the aim of recovering the slope function or its functional predictor. This paper considers online regularized learning…

Machine Learning · Statistics 2022-11-28 Yuan Mao , Zheng-Chu Guo

Unsatisfiable core analysis can boost the computation of optimum stable models for logic programs with weak constraints. However, current solvers employing unsatisfiable core analysis either run to completion, or provide no suboptimal…

Logic in Computer Science · Computer Science 2016-08-03 Mario Alviano , Carmine Dodaro

We consider the concept of a local set of inference rules. A local rule set can be automatically transformed into a rule set for which bottom-up evaluation terminates in polynomial time. The local-rule-set transformation gives…

Logic in Computer Science · Computer Science 2007-05-23 Robert Givan , David McAllester

In many applications one is interested to detect certain (known) patterns in the mean of a process with smallest delay. Using an asymptotic framework which allows to capture that feature, we study a class of appropriate sequential…

Statistics Theory · Mathematics 2018-05-01 Ansgar Steland
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