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Nuclear Magnetic Resonance (NMR) spectroscopy has served as a powerful analytical tool for studying molecular structure and dynamics in chemistry and biology. However, the processing of raw data acquired from NMR spectrometers and…

Quantitative Methods · Quantitative Biology 2023-09-15 Di Guo , Sijin Li , Jun Liu , Zhangren Tu , Tianyu Qiu , Jingjing Xu , Liubin Feng , Donghai Lin , Qing Hong , Meijin Lin , Yanqin Lin , Xiaobo Qu

Resting-state functional magnetic resonance imaging (rs-fMRI) can reflect spontaneous neural activities in brain and is widely used for brain disorder analysis.Previous studies propose to extract fMRI representations through diverse…

Quantitative Methods · Quantitative Biology 2023-06-27 Qianqian Wang , Wei Wang , Yuqi Fang , P. -T. Yap , Hongtu Zhu , Hong-Jun Li , Lishan Qiao , Mingxia Liu

High resolution magnetic resonance (MR) images are desired for accurate diagnostics. In practice, image resolution is restricted by factors like hardware, cost and processing constraints. Recently, deep learning methods have been shown to…

Machine Learning · Computer Science 2018-09-11 Venkateswararao Cherukuri , Tiantong Guo , Steven J. Schiff , Vishal Monga

Nuclear Magnetic Resonance (NMR) spectroscopy is an efficient technique to analyze chemical mixtures in which one acquires spectra of the chemical mixtures along one ore more dimensions. One of the important issues is to efficiently analyze…

Medical Physics · Physics 2020-11-03 Afef Cherni , Sandrine Anthoine , Caroline Chaux

Magnetic resonance imaging (MRI) is a highly versatile and widely used clinical imaging tool. The content of MRI images is controlled by an acquisition sequence, which coordinates the timing and magnitude of the scanner hardware…

Machine Learning · Computer Science 2023-05-24 Simon Walker-Samuel

Noises, artifacts, and loss of information caused by the magnetic resonance (MR) reconstruction may compromise the final performance of the downstream applications. In this paper, we develop a re-weighted multi-task deep learning method to…

Computer Vision and Pattern Recognition · Computer Science 2020-11-30 Kehan Qi , Yu Gong , Xinfeng Liu , Xin Liu , Hairong Zheng , Shanshan Wang

Quantitative Magnetic Resonance Imaging (MRI) is based on a two-steps approach: estimation of the magnetic moments distribution inside the body, followed by a voxel-by-voxel quantification of the human tissue properties. This splitting…

We demonstrate identification of position, material, orientation and shape of objects imaged by an $^{85}$Rb atomic magnetometer performing electromagnetic induction imaging supported by machine learning. Machine learning maximizes the…

Atomic Physics · Physics 2018-01-24 Cameron Deans , Lewis D. Griffin , Luca Marmugi , Ferruccio Renzoni

Purpose: Magnetic Resonance Spectroscopic Imaging (MRSI) maps endogenous brain metabolism while suppressing the overwhelming water signal. Water-unsuppressed MRSI (wu-MRSI) allows simultaneous imaging of water and metabolites, but large…

Image and Video Processing · Electrical Eng. & Systems 2025-12-18 Paul J. Weiser , Jiye Kim , Jongho Lee , Amirmohammad Shamaei , Gulnur Ungan , Malte Hoffmann , Antoine Klauser , Berkin Bilgic , Ovidiu C. Andronesi

For the temperature field reconstruction (TFR), a complex image-to-image regression problem, the convolutional neural network (CNN) is a powerful surrogate model due to the convolutional layer's good image feature extraction ability.…

Machine Learning · Computer Science 2022-02-15 Xiaohu Zheng , Wen Yao , Zhiqiang Gong , Yunyang Zhang , Xiaoyu Zhao , Tingsong Jiang

An early detection of different tumor subtypes is crucial for an effective guidance to personalized therapy. While much efforts focus on decoding the sequence of DNA basis to detect the genetic mutations related to cancer, it is becoming…

Quantitative susceptibility mapping (QSM) is a magnetic resonance imaging (MRI) technique that estimates magnetic susceptibility of tissue from Larmor frequency offset measurements. The generation of QSM requires solving a challenging…

Medical Physics · Physics 2020-08-18 Juan Liu , Kevin M. Koch

In spectroscopic experiments, data acquisition in multi-dimensional phase space may require long acquisition time, owing to the large phase space volume to be covered. In such case, the limited time available for data acquisition can be a…

Magnetic resonance imaging (MRI) is a widely used medical imaging modality. However, due to the limitations in hardware, scan time, and throughput, it is often clinically challenging to obtain high-quality MR images. The super-resolution…

Image and Video Processing · Electrical Eng. & Systems 2020-02-20 Qing Lyu , Hongming Shan , Ge Wang

Molecule representation learning (MRL) methods aim to embed molecules into a real vector space. However, existing SMILES-based (Simplified Molecular-Input Line-Entry System) or GNN-based (Graph Neural Networks) MRL methods either take…

Machine Learning · Computer Science 2021-09-23 Hongwei Wang , Weijiang Li , Xiaomeng Jin , Kyunghyun Cho , Heng Ji , Jiawei Han , Martin D. Burke

Magnetic Resonance Fingerprinting (MRF) is a new approach to quantitative magnetic resonance imaging that allows simultaneous measurement of multiple tissue properties in a single, time-efficient acquisition. Standard MRF reconstructs…

Computer Vision and Pattern Recognition · Computer Science 2018-12-20 Ilkay Oksuz , Gastao Cruz , James Clough , Aurelien Bustin , Nicolo Fuin , Rene M. Botnar , Claudia Prieto , Andrew P. King , Julia A. Schnabel

The growth of abnormal cells in the brain's tissue causes brain tumors. Brain tumors are considered one of the most dangerous disorders in children and adults. It develops quickly, and the patient's survival prospects are slim if not…

Image and Video Processing · Electrical Eng. & Systems 2022-10-26 Al-Akhir Nayan , Ahamad Nokib Mozumder , Md. Rakibul Haque , Fahim Hossain Sifat , Khan Raqib Mahmud , Abul Kalam Al Azad , Muhammad Golam Kibria

Brain tumors require an assessment to ensure timely diagnosis and effective patient treatment. Morphological factors such as size, location, texture, and variable appearance complicate tumor inspection. Medical imaging presents challenges,…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Md. Zahid Hasan , Abdullah Tamim , D. M. Asadujjaman , Md. Mahfujur Rahman , Md. Abu Ahnaf Mollick , Nosin Anjum Dristi , Abdullah-Al-Noman

Quantum Machine Learning (QML) continues to evolve, unlocking new opportunities for diverse applications. In this study, we investigate and evaluate the applicability of QML models for binary classification of genome sequence data by…

Machine Learning · Computer Science 2025-01-15 Navneet Singh , Shiva Raj Pokhrel

Magnetic Resonance Imaging (MRI) is a widely used imaging technique to assess brain tumor. Accurately segmenting brain tumor from MR images is the key to clinical diagnostics and treatment planning. In addition, multi-modal MR images can…

Image and Video Processing · Electrical Eng. & Systems 2021-04-21 Tongxue Zhou , Stéphane Canu , Pierre Vera , Su Ruan