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We introduce the Multicolored Graph Realization problem (MGRP). The input to the problem is a colored graph $(G,\varphi)$, i.e., a graph together with a coloring on its vertices. We can associate to each colored graph a cluster graph…

Computational Complexity · Computer Science 2021-03-25 Josep Díaz , Öznur Yaşar Diner , Maria Serna , Oriol Serra

In this work, we propose a robust and easily implemented algebraic multigrid method as a stand-alone solver or a preconditioner in Krylov subspace methods for solving either symmetric and positive definite or saddle point linear systems of…

Numerical Analysis · Mathematics 2015-03-05 Huidong Yang

Many exact search algorithms for NP-hard graph problems adopt the old Davis-Putman branch-and-reduce paradigm. The performance of these algorithms often suffers from the increasing number of graph modifications, such as vertex/edge…

Data Structures and Algorithms · Computer Science 2014-04-28 Faisal N. Abu-Khzam , Karim A. Jahed , Amer E. Mouawad

We consider discrete Poisson interface problems resulting from linear unfitted finite elements, also called cut finite elements (CutFEM). Three of these unfitted finite element methods known from the literature are studied. All three…

Numerical Analysis · Mathematics 2018-07-27 Thomas Ludescher , Sven Gross , Arnold Reusken

Many complex questions in biology, physics, and mathematics can be mapped to the graph isomorphism problem and the closely related graph automorphism problem. In particular, these problems appear in the context of network visualization,…

Data Structures and Algorithms · Computer Science 2012-11-14 Charo I. Del Genio , Thilo Gross

We consider the approximation of elliptic eigenvalue problem with an immersed interface. The main aim of this paper is to prove the stability and convergence of an immersed finite element method (IFEM) for eigenvalues using Crouzeix-Raviart…

Numerical Analysis · Mathematics 2014-12-11 Seungwoo Lee , Do Y. Kwak , Imbo Sim

The singularities that arise in elliptic boundary value problems are treated locally by a singular function boundary integral method. This method extracts the leading singular coefficients from a series expansion that describes the local…

Numerical Analysis · Mathematics 2010-06-21 George Pashos , Athanasios G. Papathanasiou , Andreas G. Boudouvis

A novel orthogonalization-free method together with two specific algorithms are proposed to solve extreme eigenvalue problems. On top of gradient-based algorithms, the proposed algorithms modify the multi-column gradient such that earlier…

Numerical Analysis · Mathematics 2021-10-15 Weiguo Gao , Yingzhou Li , Bichen Lu

In the 3-path vertex cover problem, the input is an undirected graph $G$ and an integer $k$. The goal is to decide whether there is a set of vertices $S$ of size at most $k$ such that every path with 3 vertices in $G$ contains at least one…

Data Structures and Algorithms · Computer Science 2018-09-11 Dekel Tsur

In this paper, we discuss approximating the eigenvalue problem of biharmonic equation. We first present an equivalent mixed formulation which admits amiable nested discretization. Then, we construct multi-level finite element schemes by…

Numerical Analysis · Mathematics 2016-06-20 Shuo Zhang , Yingxia Xi , Xia Ji

The inverse conductivity problem aims at determining the unknown conductivity inside a bounded domain from boundary measurements. In practical applications, algorithms based on minimizing a regularized residual functional subject to PDE…

Numerical Analysis · Mathematics 2025-10-02 Lefu Cai , Zhixin Liu , Minghui Song , Xianchao Wang

The adoption of hybrid GPU-CPU nodes in traditional supercomputing platforms opens acceleration opportunities for electronic structure calculations in materials science and chemistry applications, where medium sized Hermitian generalized…

Numerical Analysis · Computer Science 2012-07-10 Raffaele Solcà , Thomas C. Schulthess , Azzam Haidar , Stanimire Tomov , Ichitaro Yamazaki , Jack Dongarra

We present a finite-element simulation tool for calculating light fields in 3D nano-optical devices. This allows to solve challenging problems on a standard personal computer. We present solutions to eigenvalue problems, like Bloch-type…

Optics · Physics 2009-05-28 S. Burger , R. Klose , A. Schaedle , F. Schmidt , L. Zschiedrich

A number of scientific fields rely on placing permanent magnets in order to produce a desired magnetic field. We have shown in recent work that the placement process can be formulated as sparse regression. However, binary, grid-aligned…

Plasma Physics · Physics 2023-02-15 Alan A. Kaptanoglu , Rory Conlin , Matt Landreman

A multi-cube method is developed for solving systems of elliptic and hyperbolic partial differential equations numerically on manifolds with arbitrary spatial topologies. It is shown that any three-dimensional manifold can be represented as…

Computational Physics · Physics 2015-06-11 Lee Lindblom , Bela Szilagyi

Conforming hexahedral (hex) meshes are favored in simulation for their superior numerical properties, yet automatically decomposing a general 3D volume into a conforming hex mesh remains a formidable challenge. Among existing approaches,…

Computational Geometry · Computer Science 2026-01-07 Hua Tong , Yongjie Jessica Zhang

When studying boundary value problems for some partial differential equations arising in applied mathematics, we often have to study the solution of a system of partial differential equations satisfied by hypergeometric functions and find…

Classical Analysis and ODEs · Mathematics 2020-05-26 Michael Ruzhansky , Anvar Hasanov

In this paper, we study an adaptive finite element method for multiple eigenvalue problems of a class of second order elliptic equations. By using some eigenspace approximation technology and its crucial property which is also presented in…

Numerical Analysis · Mathematics 2013-09-18 Xiaoying Dai , Lianhua He , Aihui Zhou

In this paper we investigate the colorful components framework, motivated by applications emerging from comparative genomics. The general goal is to remove a collection of edges from an undirected vertex-colored graph $G$ such that in the…

Data Structures and Algorithms · Computer Science 2013-11-07 Anna Adamaszek , Alexandru Popa

We present an algorithm to approximate the real trilogarithm for a real argument with IEEE 754-1985 double precision accuracy. The approximation is structured such that it can make use of instruction-level parallelism when executed on…

Mathematical Software · Computer Science 2023-08-28 Alexander Voigt