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A major obstacle to the development of Natural Language Processing (NLP) methods in the biomedical domain is data accessibility. This problem can be addressed by generating medical data artificially. Most previous studies have focused on…

Computation and Language · Computer Science 2019-08-09 Zixu Wang , Julia Ive , Sumithra Velupillai , Lucia Specia

Artificial intelligence (AI) has demonstrated significant potential in transforming healthcare through the analysis and modeling of electronic health records (EHRs). However, the inherent heterogeneity, temporal irregularity, and…

Machine Learning · Computer Science 2025-07-18 Weijieying Ren , Jingxi Zhu , Zehao Liu , Tianxiang Zhao , Vasant Honavar

Quantum Natural Language Processing (QNLP) deals with the design and implementation of NLP models intended to be run on quantum hardware. In this paper, we present results on the first NLP experiments conducted on Noisy Intermediate-Scale…

Computation and Language · Computer Science 2023-05-05 Robin Lorenz , Anna Pearson , Konstantinos Meichanetzidis , Dimitri Kartsaklis , Bob Coecke

The unstructured nature of clinical notes within electronic health records often conceals vital patient-related information, making it challenging to access or interpret. To uncover this hidden information, specialized Natural Language…

Phenotyping is fundamental to rare disease diagnosis, but manual curation of structured phenotypes from clinical notes is labor-intensive and difficult to scale. Existing artificial intelligence approaches typically optimize individual…

Objective: Clinical deep phenotyping and phenotype annotation play a critical role in both the diagnosis of patients with rare disorders as well as in building computationally-tractable knowledge in the rare disorders field. These processes…

Natural Language Processing (NLP) is a vital computational method for addressing language processing, analysis, and generation. NLP tasks form the core of many daily applications, from automatic text correction to speech recognition. While…

Computation and Language · Computer Science 2024-10-18 Caroline Sabty

Computational phenotyping is a central informatics activity with resulting cohorts supporting a wide variety of applications. However, it is time-intensive because of manual data review and limited automation. Since LLMs have demonstrated…

Quantitative Methods · Quantitative Biology 2025-08-18 Sarah Pungitore , Shashank Yadav , Molly Douglas , Jarrod Mosier , Vignesh Subbian

A growing body of work uses Natural Language Processing (NLP) methods to automatically generate medical notes from audio recordings of doctor-patient consultations. However, there are very few studies on how such systems could be used in…

Neural networks (NNs) have become the state of the art in many machine learning applications, especially in image and sound processing [1]. The same, although to a lesser extent [2,3], could be said in natural language processing (NLP)…

Computation and Language · Computer Science 2019-07-30 Luka Gligic , Andrey Kormilitzin , Paul Goldberg , Alejo Nevado-Holgado

The application of Natural Language Processing (NLP) has achieved a high level of relevance in several areas. In the field of software engineering (SE), NLP applications are based on the classification of similar texts (e.g. software…

Software Engineering · Computer Science 2021-12-02 Eliane Maria De Bortoli Fávero , Dalcimar Casanova

Predicting health risks from electronic health records (EHR) is a topic of recent interest. Deep learning models have achieved success by modeling temporal and feature interaction. However, these methods learn insufficient representations…

Machine Learning · Computer Science 2023-12-19 Zhihao Yu , Chaohe Zhang , Yasha Wang , Wen Tang , Jiangtao Wang , Liantao Ma

Natural language processing for programming aims to use NLP techniques to assist programming. It is increasingly prevalent for its effectiveness in improving productivity. Distinct from natural language, a programming language is highly…

Computation and Language · Computer Science 2023-08-08 Qingfu Zhu , Xianzhen Luo , Fang Liu , Cuiyun Gao , Wanxiang Che

Natural Language Processing (NLP) systems often make use of machine learning techniques that are unfamiliar to end-users who are interested in analyzing clinical records. Although NLP has been widely used in extracting information from…

Human-Computer Interaction · Computer Science 2017-07-10 Gaurav Trivedi , Phuong Pham , Wendy Chapman , Rebecca Hwa , Janyce Wiebe , Harry Hochheiser

Our research investigates how Natural Language Processing (NLP) can be used to extract main topics from a larger corpus of written data, as applied to the case of identifying signaling themes in Presidential Directives (PDs) from the Reagan…

Computation and Language · Computer Science 2025-11-14 C. LeMay , A. Lane , J. Seales , M. Winstead , S. Baty

Automating test case specification generation is vital for improving the efficiency and accuracy of software testing, particularly in complex systems like high-performance Electronic Control Units (ECUs). This study investigates the use of…

Software Engineering · Computer Science 2025-05-02 Nikitha Medeshetty , Ahmad Nauman Ghazi , Sadi Alawadi , Fahed Alkhabbas

Research projects, including those focused on cancer, rely on the manual extraction of information from clinical reports. This process is time-consuming and prone to errors, limiting the efficiency of data-driven approaches in healthcare.…

Computation and Language · Computer Science 2025-05-16 J. Moreno-Casanova , J. M. Auñón , A. Mártinez-Pérez , M. E. Pérez-Martínez , M. E. Gas-López

Natural language processing supported requirements engineering is an area of research and development that seeks to apply NLP techniques, tools and resources to a variety of requirements documents or artifacts to support a range of…

Recent natural language processing (NLP) techniques have accomplished high performance on benchmark datasets, primarily due to the significant improvement in the performance of deep learning. The advances in the research community have led…

Computation and Language · Computer Science 2022-10-24 Marwan Omar , Soohyeon Choi , DaeHun Nyang , David Mohaisen

Improvement of software development methodologies attracts developers to automatic Requirement Formalisation (RF) in the Requirement Engineering (RE) field. The potential advantages by applying Natural Language Processing (NLP) and Machine…

Computation and Language · Computer Science 2023-03-24 Shekoufeh Kolahdouz-Rahimi , Kevin Lano , Chenghua Lin