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MOTIVATION: Proteins fold into complex structures that are crucial for their biological functions. Experimental determination of protein structures is costly and therefore limited to a small fraction of all known proteins. Hence, different…

Biomolecules · Quantitative Biology 2018-04-18 David Menéndez Hurtado , Karolis Uziela , Arne Elofsson

We present a simple, modular graph-based convolutional neural network that takes structural information from protein-ligand complexes as input to generate models for activity and binding mode prediction. Complex structures are generated by…

Biomolecules · Quantitative Biology 2020-02-26 Joseph A. Morrone , Jeffrey K. Weber , Tien Huynh , Heng Luo , Wendy D. Cornell

In this work, we propose a deep neural architecture that uses an attention mechanism which utilizes region based image features, the natural language question asked, and semantic knowledge extracted from the regions of an image to produce…

Computation and Language · Computer Science 2021-04-06 Tasmia Tasrin , Md Sultan Al Nahian , Brent Harrison

The demands on visual recognition systems do not end with the complexity offered by current large-scale image datasets, such as ImageNet. In consequence, we need curious and continuously learning algorithms that actively acquire knowledge…

Computer Vision and Pattern Recognition · Computer Science 2016-12-20 Christoph Käding , Erik Rodner , Alexander Freytag , Joachim Denzler

Machine Learning has been the quintessential solution for many AI problems, but learning is still heavily dependent on the specific training data. Some learning models can be incorporated with a prior knowledge in the Bayesian set up, but…

Computation and Language · Computer Science 2018-05-22 K M Annervaz , Somnath Basu Roy Chowdhury , Ambedkar Dukkipati

Visual Question Answering (VQA) attracts much attention from both industry and academia. As a multi-modality task, it is challenging since it requires not only visual and textual understanding, but also the ability to align cross-modality…

Computer Vision and Pattern Recognition · Computer Science 2022-01-27 Peixi Xiong , Quanzeng You , Pei Yu , Zicheng Liu , Ying Wu

This work investigates the challenge of learning and reasoning for Commonsense Question Answering given an external source of knowledge in the form of a knowledge graph (KG). We propose a novel graph neural network architecture, called…

Computation and Language · Computer Science 2022-09-22 Chen Zheng , Parisa Kordjamshidi

Graph clustering is a fundamental problem in machine learning. Deep learning methods achieve the state-of-the-art results in recent years, but they still cannot work without predefined cluster numbers. Such limitation motivates us to pose a…

Machine Learning · Computer Science 2024-05-21 Li Sun , Zhenhao Huang , Hao Peng , Yujie Wang , Chunyang Liu , Philip S. Yu

Visual attributes are great means of describing images or scenes, in a way both humans and computers understand. In order to establish a correspondence between images and to be able to compare the strength of each property between images,…

Computer Vision and Pattern Recognition · Computer Science 2016-09-14 Yaser Souri , Erfan Noury , Ehsan Adeli

We present new algorithms for adaptively learning artificial neural networks. Our algorithms (AdaNet) adaptively learn both the structure of the network and its weights. They are based on a solid theoretical analysis, including…

Machine Learning · Computer Science 2017-03-01 Corinna Cortes , Xavi Gonzalvo , Vitaly Kuznetsov , Mehryar Mohri , Scott Yang

Although large-scale labeled data are essential for deep convolutional neural networks (ConvNets) to learn high-level semantic visual representations, it is time-consuming and impractical to collect and annotate large-scale datasets. A…

Computer Vision and Pattern Recognition · Computer Science 2023-10-06 Huili Huang , M. Mahdi Roozbahani

The rapid progress of Artificial Intelligence research came with the development of increasingly complex deep learning models, leading to growing challenges in terms of computational complexity, energy efficiency and interpretability. In…

Machine Learning · Computer Science 2023-06-28 Yuanrong Wang , Antonio Briola , Tomaso Aste

Accurately predicting the prices of financial time series is essential and challenging for the financial sector. Owing to recent advancements in deep learning techniques, deep learning models are gradually replacing traditional statistical…

Statistical Finance · Quantitative Finance 2023-09-29 Cheng Zhang , Nilam Nur Amir Sjarif , Roslina Ibrahim

Existing datasets for tabular question answering typically focus exclusively on text within cells. However, real-world data is inherently multimodal, often blending images such as symbols, faces, icons, patterns, and charts with textual…

We apply a general deep learning framework to address the non-factoid question answering task. Our approach does not rely on any linguistic tools and can be applied to different languages or domains. Various architectures are presented and…

Computation and Language · Computer Science 2015-10-05 Minwei Feng , Bing Xiang , Michael R. Glass , Lidan Wang , Bowen Zhou

In recent years, deep learning (DL) approaches have demonstrated promising results in decoding hemodynamic responses captured by functional near-infrared spectroscopy (fNIRS), particularly in the context of brain-computer interface (BCI)…

Machine Learning · Computer Science 2025-10-09 Behtom Adeli , John Mclinden , Pankaj Pandey , Ming Shao , Yalda Shahriari

In meta-learning approaches, it is difficult for a practitioner to make sense of what kind of representations the model employs. Without this ability, it can be difficult to both understand what the model knows as well as to make meaningful…

Machine Learning · Computer Science 2022-04-05 Pedro Sandoval-Segura , Wallace Lawson

Machine learning is advancing towards a data-science approach, implying a necessity to a line of investigation to divulge the knowledge learnt by deep neuronal networks. Limiting the comparison among networks merely to a predefined…

Computer Vision and Pattern Recognition · Computer Science 2019-03-13 Arash Akbarinia , Karl R. Gegenfurtner

The last several years have seen intensive interest in exploring neural-network-based models for machine comprehension (MC) and question answering (QA). In this paper, we approach the problems by closely modelling questions in a neural…

Computation and Language · Computer Science 2017-03-28 Junbei Zhang , Xiaodan Zhu , Qian Chen , Lirong Dai , Si Wei , Hui Jiang

Whether neural networks can learn abstract reasoning or whether they merely rely on superficial statistics is a topic of recent debate. Here, we propose a dataset and challenge designed to probe abstract reasoning, inspired by a well-known…

Machine Learning · Computer Science 2018-07-12 David G. T. Barrett , Felix Hill , Adam Santoro , Ari S. Morcos , Timothy Lillicrap