Related papers: Computing directed path-width and directed tree-wi…
In this article we study the treewidth of the \emph{display graph}, an auxiliary graph structure obtained from the fusion of phylogenetic (i.e., evolutionary) trees at their leaves. Earlier work has shown that the treewidth of the display…
This work presents novel algorithms for learning Bayesian network structures with bounded treewidth. Both exact and approximate methods are developed. The exact method combines mixed-integer linear programming formulations for structure…
We study DAG-depth, a structural depth measure of directed graphs, which naturally extends the tree-depth of ordinary graphs. We define a DAG-depth decomposition as a strategy for the cop player in the lift-free version of the…
We develop a framework for applying treewidth-based dynamic programming on graphs with "hybrid structure", i.e., with parts that may not have small treewidth but instead possess other structural properties. Informally, this is achieved by…
We here investigate on the complexity of computing the \emph{tree-length} and the \emph{tree-breadth} of any graph $G$, that are respectively the best possible upper-bounds on the diameter and the radius of the bags in a tree decomposition…
This paper outlines a method to determine whether two label-regular directed trees, are isomorphic and when they are almost isomorphic. The approach involves reinterpreting label-regular directed trees as universal covers of rooted graphs.…
Phylogenetic trees and networks are leaf-labelled graphs used to model evolution. Display graphs are created by identifying common leaf labels in two or more phylogenetic trees or networks. The treewidth of such graphs is bounded as a…
In this series, we introduce and investigate the concept of connectoids, which captures the connectivity structure of various discrete objects such as undirected graphs, directed graphs, bidirected graphs, hypergraphs and finitary matroids.…
We prove a general width duality theorem for combinatorial structures with well-defined notions of cohesion and separation. These might be graphs and matroids, but can be much more general or quite different. The theorem asserts a duality…
In this paper, we present a Branch and Bound algorithm called QuickBB for computing the treewidth of an undirected graph. This algorithm performs a search in the space of perfect elimination ordering of vertices of the graph. The algorithm…
We prove that a connected graph has linear rank-width 1 if and only if it is a distance-hereditary graph and its split decomposition tree is a path. An immediate consequence is that one can decide in linear time whether a graph has linear…
An important tool in analyzing complex social and information networks is s-t simple path counting, which is known to be #P-complete. In this paper, we study efficient s-t simple path counting in directed graphs. For a given pair of…
We revisit a graph width parameter that we dub bipartite treewidth (btw). Bipartite treewidth can be seen as a common generalization of treewidth and the odd cycle transversal number, and is closely related to odd-minors. Intuitively, a…
We introduce the notion of quota trees in directed graphs. Given a nonnegative integer ``quota'' for each vertex of a directed multigraph $G$, a quota tree is an immersed rooted tree which hits each vertex of $G$ the prescribed number of…
In the present paper, we study algorithmic questions for the arc-intersection graph of directed paths on a tree. Such graphs are known to be perfect (proved by Monma and Wei in 1986). We present faster algorithms than all previously known…
In this paper we show a correspondence between directed graphs and bipartite undirected graphs with a perfect matching, that allows to study properties of directed graphs through the properties of the corresponding undirected graphs. In…
In this work, we establish a general relationship between the enumeration of weighted directed paths and skew Schur functions, extending work by Bousquet-M\'elou, who expressed generating functions of discrete excursions in terms of…
A connected graph G is called matching covered if every edge of G is contained in a perfect matching. Perfect matching width is a width parameter for matching covered graphs based on a branch decomposition. It was introduced by Norine and…
We show that an algorithmic construction of sequences of recursive trees leads to a direct proof of the convergence of random recursive trees in an associated Doob-Martin compactification; it also gives a representation of the limit in…
In this paper we study metric ribbon graphs, in particular, directed metric ribbon graphs. These ribbon graphs are dual to bipartite maps and appear in the context of Abelian differentials. We prove that it is possible to decompose a…