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Methods for time series prediction and classification of gene regulatory networks (GRNs) from gene expression data have been treated separately so far. The recent emergence of attention-based recurrent neural networks (RNN) models boosted…
Foundation models in language and vision benefit from a unified discrete token interface that converts raw inputs into sequences for scalable pre-training and inference. For graphs, an effective tokenizer should yield reusable discrete…
Attention mechanisms represent a fundamental paradigm shift in neural network architectures, enabling models to selectively focus on relevant portions of input sequences through learned weighting functions. This monograph provides a…
Recurrent neural nets (RNN) and convolutional neural nets (CNN) are widely used on NLP tasks to capture the long-term and local dependencies, respectively. Attention mechanisms have recently attracted enormous interest due to their highly…
While convolutional neural networks have gained impressive success recently in solving structured prediction problems such as semantic segmentation, it remains a challenge to differentiate individual object instances in the scene. Instance…
A straightforward approach to context-aware neural machine translation consists in feeding the standard encoder-decoder architecture with a window of consecutive sentences, formed by the current sentence and a number of sentences from its…
In this paper we propose a neural network model with a novel Sequential Attention layer that extends soft attention by assigning weights to words in an input sequence in a way that takes into account not just how well that word matches a…
We analyze the performance of encoder-decoder neural models and compare them with well-known established methods. The latter represent different classes of traditional approaches that are applied to the monotone sequence-to-sequence tasks…
Deep Recurrent Neural Network (RNN) has gained popularity in many sequence classification tasks. Beyond predicting a correct class for each data instance, data scientists also want to understand what differentiating factors in the data have…
In this work we formulate the problem of image captioning as a multimodal translation task. Analogous to machine translation, we present a sequence-to-sequence recurrent neural networks (RNN) model for image caption generation. Different…
Many of the current state-of-the-art Large Vocabulary Continuous Speech Recognition Systems (LVCSR) are hybrids of neural networks and Hidden Markov Models (HMMs). Most of these systems contain separate components that deal with the…
We introduce a novel encoder-decoder architecture to embed functional processes into latent vector spaces. This embedding can then be decoded to sample the encoded functions over any arbitrary domain. This autoencoder generalizes the…
Deep neural networks are largely used for complex prediction tasks. There is plenty of empirical evidence of their successful end-to-end training for a diversity of tasks. Success is often measured based solely on the final performance of…
During the last couple of years, Recurrent Neural Networks (RNN) have reached state-of-the-art performances on most of the sequence modelling problems. In particular, the "sequence to sequence" model and the neural CRF have proved to be…
In this paper, we study novel neural network structures to better model long term dependency in sequential data. We propose to use more memory units to keep track of more preceding states in recurrent neural networks (RNNs), which are all…
Current state-of-the-art systems for sequence labeling are typically based on the family of Recurrent Neural Networks (RNNs). However, the shallow connections between consecutive hidden states of RNNs and insufficient modeling of global…
Gating mechanisms are widely used in neural network models, where they allow gradients to backpropagate more easily through depth or time. However, their saturation property introduces problems of its own. For example, in recurrent models…
We introduce an online neural sequence to sequence model that learns to alternate between encoding and decoding segments of the input as it is read. By independently tracking the encoding and decoding representations our algorithm permits…
In this work, we propose a novel recurrent neural network (RNN) architecture. The proposed RNN, gated-feedback RNN (GF-RNN), extends the existing approach of stacking multiple recurrent layers by allowing and controlling signals flowing…
Generative models for dialog systems have gained much interest because of the recent success of RNN and Transformer based models in tasks like question answering and summarization. Although the task of dialog response generation is…