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Continuous-time Markov chains are frequently used as stochastic models for chemical reaction networks, especially in the growing field of systems biology. A fundamental problem for these Stochastic Chemical Reaction Networks (SCRNs) is to…

Probability · Mathematics 2023-04-12 Felipe A. Campos , Simone Bruno , Yi Fu , Domitilla Del Vecchio , Ruth J. Williams

Recent work has shown that recurrent neural networks (RNNs) can implicitly capture and exploit hierarchical information when trained to solve common natural language processing tasks such as language modeling (Linzen et al., 2016) and…

Computation and Language · Computer Science 2018-08-29 Ke Tran , Arianna Bisazza , Christof Monz

Classical methods of solving spatiotemporal dynamical systems include statistical approaches such as autoregressive integrated moving average, which assume linear and stationary relationships between systems' previous outputs. Development…

Dynamical Systems · Mathematics 2022-02-16 Yonggi Park , Kelum Gajamannage , Dilhani I. Jayathilake , Erik M. Bollt

We define a general class of network formation models, Statistical Exponential Random Graph Models (SERGMs), that nest standard exponential random graph models (ERGMs) as a special case. We provide the first general results on when these…

Physics and Society · Physics 2014-06-26 Arun G. Chandrasekhar , Matthew O. Jackson

Networks model the architecture backbone of complex systems. The backbone itself can change over time leading to what is called `temporal networks'. Interpreting temporal networks as trajectories in graph space of a latent graph dynamics…

Physics and Society · Physics 2024-12-20 Annalisa Caligiuri , Tobias Galla , Lucas Lacasa

We investigate nonlinear regression for nonstationary sequential data. In most real-life applications such as business domains including finance, retail, energy and economy, timeseries data exhibits nonstationarity due to the temporally…

Machine Learning · Computer Science 2020-06-19 Fatih Ilhan , Oguzhan Karaahmetoglu , Ismail Balaban , Suleyman Serdar Kozat

Real-world networks are composed of diverse interacting and evolving entities, while most of existing researches simply characterize them as particular static networks, without consideration of the evolution trend in dynamic networks.…

Social and Information Networks · Computer Science 2020-06-16 Yu Xie , Chunyi Li , Bin Yu , Chen Zhang , Zhouhua Tang

Process Mining consists of techniques where logs created by operative systems are transformed into process models. In process mining tools it is often desired to be able to classify ongoing process instances, e.g., to predict how long the…

Machine Learning · Computer Science 2019-02-05 Markku Hinkka , Teemu Lehto , Keijo Heljanko , Alexander Jung

In this paper, the class of random irregular block-hierarchical networks is defined and algorithms for generation and calculation of network properties are described. The algorithms presented for this class of networks are more efficient…

Data Structures and Algorithms · Computer Science 2018-05-04 Svetlana Avetisyan , Mikayel Samvelyan , Martun Karapetyan

Neural networks excel in detecting regular patterns but are less successful in representing and manipulating complex data structures, possibly due to the lack of an external memory. This has led to the recent development of a new line of…

Artificial Intelligence · Computer Science 2018-11-29 Trang Pham , Truyen Tran , Svetha Venkatesh

We propose a new model to account for the main structural characteristics of rock fracture networks (RFNs). The model is based on a generalization of the random neighborhood graphs to consider fractures embedded into rectangular spaces. We…

Geophysics · Physics 2017-03-09 Ernesto Estrada , Matthew Sheerin

We describe a method to construct directed networks from multivariate time series which has several advantages over the widely accepted methods. This method is based on an information theoretic reduction of linear (auto-regressive) models.…

Data Analysis, Statistics and Probability · Physics 2018-08-13 Toshihiro Tanizawa , Tomomichi Nakamura , Fumihiko Taya , Michael Small

Temporal networks of face-to-face interactions between individuals are useful proxies of the dynamics of social systems on fast time scales. Several empirical statistical properties of these networks have been shown to be robust across a…

Physics and Society · Physics 2023-02-03 Didier Le Bail , Mathieu Génois , Alain Barrat

We study a class models of correlated random networks in which vertices are characterized by \textit{hidden variables} controlling the establishment of edges between pairs of vertices. We find analytical expressions for the main topological…

Disordered Systems and Neural Networks · Physics 2009-11-10 Marian Boguna , Romualdo Pastor-Satorras

We extend Neural Processes (NPs) to sequential data through Recurrent NPs or RNPs, a family of conditional state space models. RNPs model the state space with Neural Processes. Given time series observed on fast real-world time scales but…

Machine Learning · Computer Science 2019-11-07 Timon Willi , Jonathan Masci , Jürgen Schmidhuber , Christian Osendorfer

In recent years, machine learning has been adopted to complex networks, but most existing works concern about the structural properties. To use machine learning to detect phase transitions and accurately identify the critical transition…

Physics and Society · Physics 2020-01-08 Qi Ni , Ming Tang , Ying Liu , Ying-Cheng Lai

Complex networks representing social interactions, brain activities, molecular structures have been studied widely to be able to understand and predict their characteristics as graphs. Models and algorithms for these networks are used in…

Social and Information Networks · Computer Science 2022-10-24 Murat Çelik , Ali Baran Taşdemir , Lale Özkahya

Networked data, in which every training example involves two objects and may share some common objects with others, is used in many machine learning tasks such as learning to rank and link prediction. A challenge of learning from networked…

Machine Learning · Computer Science 2017-11-23 Yuanhong Wang , Yuyi Wang , Xingwu Liu , Juhua Pu

Mechanistic network models specify the mechanisms by which networks grow and change, allowing researchers to investigate complex systems using both simulation and analytical techniques. Unfortunately, it is difficult to write likelihoods…

Methodology · Statistics 2023-07-19 Jonathan Larson , Jukka-Pekka Onnela

The proliferation of sensor devices monitoring human activity generates voluminous amount of temporal sequences needing to be interpreted and categorized. Moreover, complex behavior detection requires the personalization of multi-sensor…

Machine Learning · Computer Science 2016-02-08 Myriam Abramson