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We develop a new class of random graph models for the statistical estimation of network formation -- subgraph generated models (SUGMs). Various subgraphs -- e.g., links, triangles, cliques, stars -- are generated and their union results in…

Physics and Society · Physics 2024-11-27 Arun G. Chandrasekhar , Matthew O. Jackson

In data analysis, latent variables play a central role because they help provide powerful insights into a wide variety of phenomena, ranging from biological to human sciences. The latent tree model, a particular type of probabilistic…

Machine Learning · Computer Science 2014-02-05 Raphaël Mourad , Christine Sinoquet , Nevin L. Zhang , Tengfei Liu , Philippe Leray

We introduce Latent Space Distribution Matching (LSDM), a novel framework for semi-supervised generative modeling of conditional distributions. LSDM operates in two stages: (i) learning a low-dimensional latent space from both paired and…

Machine Learning · Statistics 2026-03-05 Kwong Yu Chong , Long Feng

Tree structured graphical models are powerful at expressing long range or hierarchical dependency among many variables, and have been widely applied in different areas of computer science and statistics. However, existing methods for…

Machine Learning · Statistics 2014-01-17 Le Song , Han Liu , Ankur Parikh , Eric Xing

With the advent of modern statistical software, complex experimental designs are now routinely employed in many areas of research. Failing to correctly identify the structure of the experimental design can lead to incorrect model selection…

Computation · Statistics 2025-07-09 Damianos Michaelides , Simon T. Bate , Marion J. Chatfield

Consider~\(n\) nodes~\(\{X_i\}_{1 \leq i \leq n}\) independently distributed in the unit square~\(S,\) each according to a distribution~\(f.\) Nodes~\(X_i\) and~\(X_j\) are joined by an edge if the Euclidean distance~\(d(X_i,X_j)\) is less…

Probability · Mathematics 2021-03-02 Ghurumuruhan Ganesan

Latent space models are frequently used for modeling single-layer networks and include many popular special cases, such as the stochastic block model and the random dot product graph. However, they are not well-developed for more complex…

Methodology · Statistics 2021-07-09 Peter W. MacDonald , Elizaveta Levina , Ji Zhu

Graph auto-encoders have proved to be useful in network embedding task. However, current models only consider explicit structures and fail to explore the informative latent structures cohered in networks. To address this issue, we propose a…

Machine Learning · Computer Science 2021-10-01 Minglong Lei , Yong Shi , Lingfeng Niu

Model checking is essential to evaluate the adequacy of statistical models and the validity of inferences drawn from them. Particularly, hierarchical models such as latent Gaussian models (LGMs) pose unique challenges as it is difficult to…

Methodology · Statistics 2023-07-25 Rafael Cabral , David Bolin , Håvard Rue

In this work we perform a detailed statistical analysis of topological and spectral properties of random geometric graphs (RGGs); a graph model used to study the structure and dynamics of complex systems embedded in a two dimensional space.…

Disordered Systems and Neural Networks · Physics 2020-10-21 R. Aguilar-Sanchez , J. A. Mendez-Bermudez , Francisco A. Rodrigues , Jose M. Sigarreta

Interconnected networks of rigid struts are critical for application in lightweight, load-bearing structures. However, accurately modeling stress distribution in these strut lattices poses significant computational challenges due to its…

Physical systems with complex unsteady dynamics, such as fluid flows, are often poorly represented by a single mean solution. For many practical applications, it is crucial to access the full distribution of possible states, from which…

Computational Physics · Physics 2025-04-07 Mario Lino , Tobias Pfaff , Nils Thuerey

We propose a one-step procedure to estimate the latent positions in random dot product graphs efficiently. Unlike the classical spectral-based methods such as the adjacency and Laplacian spectral embedding, the proposed one-step procedure…

Statistics Theory · Mathematics 2020-11-16 Fangzheng Xie , Yanxun Xu

Respondent-driven sampling (RDS) is a sampling scheme used in socially connected human populations lacking a sampling frame. One of the first steps to make design-based inferences from RDS data is to estimate the sampling probabilities. A…

Methodology · Statistics 2025-03-19 Alejandro Sepulveda-Peñaloza , Isabelle S. Beaudry

Functional brain graphs are often characterized with separate graph-theoretic or spectral descriptors, overlooking how these properties covary and partially overlap across brains and conditions. We anticipate that dense, weighted functional…

Neurons and Cognition · Quantitative Biology 2025-11-07 Subati Abulikemu , Tiago Azevedo , Michail Mamalakis , John Suckling

Recent work in graph models has found that probabilistic hyperedge replacement grammars (HRGs) can be extracted from graphs and used to generate new random graphs with graph properties and substructures close to the original. In this paper,…

Social and Information Networks · Computer Science 2018-06-22 Xinyi Wang , Salvador Aguinaga , Tim Weninger , David Chiang

Large language models (LLMs) have demonstrated promising capabilities in Text-Attributed Graph (TAG) understanding. Recent studies typically focus on verbalizing the graph structures via handcrafted prompts, feeding the target node and its…

Artificial Intelligence · Computer Science 2026-01-21 Zijun Di , Bin Lu , Huquan Kang , Luoyi Fu , Jiaxin Ding , Xiaoying Gan , Lei Zhou , Xinbing Wang , Chenghu Zhou

Motivated by the problem of inferring the graph structure of functional connectivity networks from multi-level functional magnetic resonance imaging data, we develop a valid inference framework for high-dimensional graphical models that…

Methodology · Statistics 2024-03-18 Kun Yue , Eardi Lila , Ali Shojaie

Large language models have been extensively studied as neural knowledge bases for their knowledge access, editability, reasoning, and explainability. However, few works focus on the structural patterns of their knowledge. Motivated by this…

Computation and Language · Computer Science 2025-05-28 Utkarsh Sahu , Zhisheng Qi , Yongjia Lei , Ryan A. Rossi , Franck Dernoncourt , Nesreen K. Ahmed , Mahantesh M Halappanavar , Yao Ma , Yu Wang

Neural models learn representations of high-dimensional data on low-dimensional manifolds. Multiple factors, including stochasticities in the training process, model architectures, and additional inductive biases, may induce different…

Machine Learning · Computer Science 2025-12-02 Hanlin Yu , Berfin Inal , Georgios Arvanitidis , Soren Hauberg , Francesco Locatello , Marco Fumero