Related papers: Microscopy Cell Segmentation via Convolutional LST…

The automated analysis of microscopy images is a challenge in the context of single-cell tracking and quantification. This work has as goals the study of the performance of deep learning for segmenting microscopy images and the improvement…

Segmentation in 3D scans is playing an increasingly important role in current clinical practice supporting diagnosis, tissue quantification, or treatment planning. The current 3D approaches based on convolutional neural networks usually…

Reliable cell segmentation and classification from biomedical images is a crucial step for both scientific research and clinical practice. A major challenge for more robust segmentation and classification methods is the large variations in…

An automatic approach to counting any kind of cells could alleviate work of the experts and boost the research in fields such as regenerative medicine. In this paper, a method for microscopy cell counting using multiple frames (hence…

The development of efficient segmentation strategies for medical images has evolved from its initial dependence on Convolutional Neural Networks (CNNs) to the current investigation of hybrid models that combine CNNs with Vision Transformers…

There is large consent that successful training of deep networks requires many thousand annotated training samples. In this paper, we present a network and training strategy that relies on the strong use of data augmentation to use the…

This paper presents a novel method to involve both spatial and temporal features for semantic video segmentation. Current work on convolutional neural networks(CNNs) has shown that CNNs provide advanced spatial features supporting a very…

The ability to automatically detect certain types of cells or cellular subunits in microscopy images is of significant interest to a wide range of biomedical research and clinical practices. Cell detection methods have evolved from…

Human brain is a layered structure, and performs not only a feedforward process from a lower layer to an upper layer but also a feedback process from an upper layer to a lower layer. The layer is a collection of neurons, and neural network…

The accurate segmentation and tracking of cells in microscopy image sequences is an important task in biomedical research, e.g., for studying the development of tissues, organs or entire organisms. However, the segmentation of touching…

Object segmentation and structure localization are important steps in automated image analysis pipelines for microscopy images. We present a convolution neural network (CNN) based deep learning architecture for segmentation of objects in…

We propose a 3D convolutional neural network to simultaneously segment and detect cell nuclei in confocal microscopy images. Mirroring the co-dependency of these tasks, our proposed model consists of two serial components: the first part…

We consider referring image segmentation. It is a problem at the intersection of computer vision and natural language understanding. Given an input image and a referring expression in the form of a natural language sentence, the goal is to…

Most of the semantic segmentation approaches have been developed for single image segmentation, and hence, video sequences are currently segmented by processing each frame of the video sequence separately. The disadvantage of this is that…

Automatic segmentation of left ventricle (LV) myocardium in cardiac short-axis cine MR images acquired on subjects with myocardial infarction is a challenging task, mainly because of the various types of image inhomogeneity caused by the…

Semantic Segmentation is an important module for autonomous robots such as self-driving cars. The advantage of video segmentation approaches compared to single image segmentation is that temporal image information is considered, and their…

Medical image segmentation has been very challenging due to the large variation of anatomy across different cases. Recent advances in deep learning frameworks have exhibited faster and more accurate performance in image segmentation. Among…

In recent years, computer-aided diagnosis has become an increasingly popular topic. Methods based on convolutional neural networks have achieved good performance in medical image segmentation and classification. Due to the limitations of…

Brain tumor segmentation plays a pivotal role in medical image processing. In this work, we aim to segment brain MRI volumes. 3D convolution neural networks (CNN) such as 3D U-Net and V-Net employing 3D convolutions to capture the…

Cell segmentation and tracking in microscopy images are of great significance to new discoveries in biology and medicine. In this study, we propose a novel approach to combine cell segmentation and cell tracking into a unified end-to-end…