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We present a simple model of network dynamics that can be solved analytically for uniform networks. We obtain the dynamics of response of the system to perturbations. The analytical solution is an excellent approximation for random…

Cellular Automata and Lattice Gases · Physics 2009-11-11 M. A. M. de Aguiar , Irving R. Epstein , Yaneer Bar-Yam

Dynamical networks are powerful tools for modeling a broad range of complex systems, including financial markets, brains, and ecosystems. They encode how the basic elements (nodes) of these systems interact altogether (via links) and evolve…

Physics and Society · Physics 2019-03-13 Edward Laurence , Nicolas Doyon , Louis J Dubé , Patrick Desrosiers

Biological and social networks have recently attracted enormous attention between physicists. Among several, two main aspects may be stressed: A non trivial topology of the graph describing the mutual interactions between agents exists…

Statistical Mechanics · Physics 2015-05-19 Adriano Barra , Elena Agliari

This paper develops the concept of decomposition for chemical reaction networks, based on which a network decomposition technique is proposed to capture the stability of large-scale networks characterized by a high number of species, high…

Dynamical Systems · Mathematics 2021-02-23 Yafei Lu , Chuanhou Gao , Denis Dochain

We investigate structural transitions in adaptive networks where node states remain fixed and only the connections evolve via state-dependent rewiring. Using a general framework characterized by probabilistic rules for disconnection and…

Physics and Society · Physics 2026-01-23 R. Cárdenas-Sabando , M. G. Cosenza , J. C. González-Avella

Motivated by bacterial chemotaxis and multi-species ecological interactions in heterogeneous environments, we study a general one-dimensional reaction-cross-diffusion system in the presence of spatial heterogeneity in both transport and…

Pattern Formation and Solitons · Physics 2023-03-08 Eamonn A. Gaffney , Andrew L. Krause , Philip K. Maini , Chenyuan Wang

We investigate emergence of the global collective behavior in networks of diffusively coupled identical oscillators, which in the established model is an invariant manifold of the motion equations. The interaction is modeled with the graph…

Dynamical Systems · Mathematics 2013-03-14 Marcos D. N. Maia

We provide a rigorous solution to the problem of constructing a structural evolution for a network of coupled identical dynamical units that switches between specified topologies without constraints on their structure. The evolution of the…

Physics and Society · Physics 2016-01-20 Charo I. del Genio , Miguel Romance , Regino Criado , Stefano Boccaletti

Many real world networks are characterized by adaptive changes in their topology depending on the dynamic state of their nodes. Here we study epidemic dynamics in an adaptive network, where susceptibles are able to avoid contact with…

Populations and Evolution · Quantitative Biology 2007-05-23 Thilo Gross , Carlos Dommar D'Lima , Bernd Blasius

The brain's structural and functional systems, protein-protein interaction, and gene networks are examples of biological systems that share some features of complex networks, such as highly connected nodes, modularity, and small-world…

The behavior of the network and its stability are governed by both dynamics of individual nodes as well as their topological interconnections. Attention mechanism as an integral part of neural network models was initially designed for…

Machine Learning · Computer Science 2022-12-20 Nooshin Bahador , Milad Lankarany

In spite of a few attempts in understanding the dynamical robustness of complex networks, this extremely important subject of research is still in its dawn as compared to the other dynamical processes on networks. We hereby consider the…

Adaptation and Self-Organizing Systems · Physics 2022-03-24 Soumen Majhi

This study addresses the challenge of predicting network dynamics, such as forecasting disease spread in social networks or estimating species populations in predator-prey networks. Accurate predictions in large networks are difficult due…

Social and Information Networks · Computer Science 2023-08-23 Rui Luo

We introduce and solve a general model of dynamic response under external perturbations. This model captures a wide range of systems out of equilibrium including Ising models of physical systems, social opinions, and population genetics.…

Exactly Solvable and Integrable Systems · Physics 2007-11-19 David D. Chinellato , Marcus A. M. de Aguiar , Irving R. Epstein , Dan Braha , Yaneer Bar-Yam

The evolution of chemical reaction networks is often analyzed through kinetic models and energy landscapes, but these approaches fail to capture the deeper structural constraints governing complexity growth. In chemical reaction networks,…

Molecular Networks · Quantitative Biology 2025-04-22 Anderson M. Rodriguez

Network topology inference is a cornerstone problem in statistical analyses of complex systems. In this context, the fresh look advocated here permeates benefits from convex optimization and graph signal processing, to identify the…

Social and Information Networks · Computer Science 2016-04-12 Santiago Segarra , Antonio G. Marques , Gonzalo Mateos , Alejandro Ribeiro

We study the effect of adding to a directed chain of interconnected systems a directed feedback from the last element in the chain to the first. The problem is closely related to the fundamental question of how a change in network topology…

Dynamical Systems · Mathematics 2015-05-22 Alexander N. Gorban , Nick Jarman , Erik Steur , Cees van Leeuwen , Ivan Tyukin

This paper studies the design of self-adjusting networks whose topology dynamically adapts to the workload, in an online and demand-aware manner. This problem is motivated by emerging optical technologies which allow to reconfigure the…

Networking and Internet Architecture · Computer Science 2019-04-09 Chen Avin , Stefan Schmid

Reaction-diffusion systems have been proposed as a model for pattern formation and morphogenesis. The Fickian diffusion typically employed in these constructions model the Brownian motion of particles. The biological and chemical elements…

Quantitative Methods · Quantitative Biology 2023-11-09 Siddhartha Srivastava , Krishna Garikipati

We derive the generalized master equation for reaction-diffusion on networks from an underlying stochastic process, the continuous time random walk (CTRW). The non-trivial incorporation of the reaction process into the CTRW is achieved by…

Dynamical Systems · Mathematics 2013-03-12 Christopher N. Angstmann , Isaac C. Donnelly , Bruce I. Henry