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Despite that going deep has proven successful in many neural architectures, the existing graph transformers are relatively shallow. In this work, we explore whether more layers are beneficial to graph transformers, and find that current…

Machine Learning · Computer Science 2023-03-02 Haiteng Zhao , Shuming Ma , Dongdong Zhang , Zhi-Hong Deng , Furu Wei

Electroencephalography (EEG)-based brain-computer interfaces facilitate direct communication with a computer, enabling promising applications in human-computer interactions. However, their utility is currently limited because EEG decoding…

Machine Learning · Computer Science 2026-02-10 Shanglin Li , Shiwen Chu , Okan Koç , Yi Ding , Qibin Zhao , Motoaki Kawanabe , Ziheng Chen

Deep neural network architectures often consist of repetitive structural elements. We introduce an approach that reveals these patterns and can be broadly applied to the study of deep learning. Similarly to how a power strip helps untangle…

Statistical Mechanics · Physics 2025-07-03 Donghee Lee , Hye-Sung Lee , Jaeok Yi

Hyperbolic spaces provide a natural geometry for representing hierarchical and tree-structured data due to their exponential volume growth. To leverage these benefits, neural networks require intrinsic and efficient components that operate…

Machine Learning · Computer Science 2026-02-26 Ziheng Chen , Bernhard Schölkopf , Nicu Sebe

The hyperbolic random graph model (HRG) has proven useful in the analysis of scale-free networks, which are ubiquitous in many fields, from social network analysis to biology. However, working with this model is algorithmically and…

Computational Geometry · Computer Science 2019-01-08 Eryk Kopczyński , Dorota Celińska-Kopczyńska

High-dimensional multiplex graphs are characterized by their high number of complementary and divergent dimensions. The existence of multiple hierarchical latent relations between the graph dimensions poses significant challenges to…

Machine Learning · Computer Science 2025-01-30 Kamel Abdous , Nairouz Mrabah , Mohamed Bouguessa

Graph neural networks (GNNs) are widely used as surrogates for costly experiments and first-principles simulations to study the behavior of compounds at atomistic scale, and their architectural complexity is constantly increasing to enable…

Machine Learning · Computer Science 2026-05-04 Arindam Chowdhury , Massimiliano Lupo Pasini

Answering complex first-order logic (FOL) queries on knowledge graphs is essential for reasoning. Symbolic methods offer interpretability but struggle with incomplete graphs, while neural approaches generalize better but lack transparency.…

Artificial Intelligence · Computer Science 2026-03-18 Lihui Liu

Recently, there has been a surge of interest in representation learning in hyperbolic spaces, driven by their ability to represent hierarchical data with significantly fewer dimensions than standard Euclidean spaces. However, the viability…

Machine Learning · Computer Science 2022-11-02 Melanie Weber , Manzil Zaheer , Ankit Singh Rawat , Aditya Menon , Sanjiv Kumar

-Background. Network neuroscience examines the brain as a complex system represented by a network (or connectome), providing deeper insights into the brain morphology and function, allowing the identification of atypical brain connectivity…

Neurons and Cognition · Quantitative Biology 2020-09-01 Mert Lostar , Islem Rekik

Even though convolutional neural networks have become the method of choice in many fields of computer vision, they still lack interpretability and are usually designed manually in a cumbersome trial-and-error process. This paper aims at…

Computer Vision and Pattern Recognition · Computer Science 2019-12-12 Maria Ximena Bastidas Rodriguez , Adrien Gruson , Luisa F. Polania , Shin Fujieda , Flavio Prieto Ortiz , Kohei Takayama , Toshiya Hachisuka

Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between…

Social and Information Networks · Computer Science 2021-05-21 Bianka Kovács , Gergely Palla

Machine learning models that can exploit the inherent structure in data have gained prominence. In particular, there is a surge in deep learning solutions for graph-structured data, due to its wide-spread applicability in several fields.…

Machine Learning · Computer Science 2020-02-12 Uday Shankar Shanthamallu , Jayaraman J. Thiagarajan , Andreas Spanias

Hyperbolic geometry has been successfully applied in modeling brain cortical and subcortical surfaces with general topological structures. However such approaches, similar to other surface based brain morphology analysis methods, usually…

Image and Video Processing · Electrical Eng. & Systems 2021-02-23 J. Zhang , Q. Dong , J. Shi , Q. Li , C. M. Stonnington , B. A. Gutman , K. Chen , E. M. Reiman , R. J. Caselli , P. M. Thompson , J. Ye , Y. Wang

Graph embedding methods represent nodes in a continuous vector space, preserving information from the graph (e.g. by sampling random walks). There are many hyper-parameters to these methods (such as random walk length) which have to be…

Machine Learning · Computer Science 2018-12-27 Sami Abu-El-Haija , Bryan Perozzi , Rami Al-Rfou , Alex Alemi

Deep neural network models have shown a great potential in accelerating the simulation of fluid dynamic systems. Once trained, these models can make inference within seconds, thus can be extremely efficient. However, they suffer from a…

Fluid Dynamics · Physics 2022-02-23 Wenhui Peng , Zelong Yuan , Jianchun Wang

Graph neural networks (GNNs) aim to learn well-trained representations in a lower-dimension space for downstream tasks while preserving the topological structures. In recent years, attention mechanism, which is brilliant in the fields of…

Social and Information Networks · Computer Science 2026-05-12 Chengcheng Sun , Chenhao Li , Xiang Lin , Tianji Zheng , Fanrong Meng , Xiaobin Rui , Zhixiao Wang

Graph embedding methods aim at finding useful graph representations by mapping nodes to a low-dimensional vector space. It is a task with important downstream applications, such as link prediction, graph reconstruction, data visualization,…

Machine Learning · Computer Science 2022-09-13 Said Kerrache , Hafida Benhidour

Learning fine-grained embeddings from coarse labels is a challenging task due to limited label granularity supervision, i.e., lacking the detailed distinctions required for fine-grained tasks. The task becomes even more demanding when…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Shu-Lin Xu , Yifan Sun , Faen Zhang , Anqi Xu , Xiu-Shen Wei , Yi Yang

It has been shown that semi-parametric methods, which combine standard neural networks with non-parametric components such as external memory modules and data retrieval, are particularly helpful in data scarcity and out-of-distribution…

Machine Learning · Computer Science 2023-10-18 Zihan Qiu , Zhen Liu , Shuicheng Yan , Shanghang Zhang , Jie Fu
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