Related papers: On ocean ecosystem discrete time dynamics generate…
We revisit the problem of a triad of resonantly interacting nonlinear waves driven by an external force applied to the unstable mode of the triad. The equations are Hamiltonian, and can be reduced to a dynamical system for 5 real variables…
Preliminary results of our investigations on solving indefinite qua\-dra\-tic programs by dynamical systems are given. First, dynamical systems corresponding to two fundamental DC programming algorithms to deal with indefinite quadratic…
The generalized Lotka-Volterra (gLV) equations model the microbiome as a collection of interacting ecological species. Here we use a particular experimentally-derived gLV model of C. difficile infection (CDI) as a case study to generate…
The Lotka-Volterra model of competition has been studied by numerical simulations using the Runge-Kutta-Fehlberg algorithm. The stable fixed points, unstable fixed point, saddle node, basins of attraction, and the separatices are found. The…
We consider the problem of parameter estimation in dynamic systems described by ordinary differential equations. A review of the existing literature emphasizes the need for deterministic global optimization methods due to the nonconvex…
Marine ecosystem models are developed to understand and simulate the biogeochemical processes involved in marine ecosystems. Parekh, Follows and Boyle introduced the $PO_4$-$DOP$-$Fe$ model of the coupled phosphorus and iron cycles in 2005.…
In this work we study the stability of the equilibria reached by ecosystems formed by a large number of species. The model we focus on are Lotka-Volterra equations with symmetric random interactions. Our theoretical analysis, confirmed by…
Biological and artificial microswimmers often self-propel in external flows of vortical nature; relevant examples include algae in small-scale ocean eddies, spermatozoa in uterine peristaltic flows and bacteria in microfluidic devices. A…
Ecological communities with many species can be classified into dynamical phases. In systems with all-to-all interactions, a phase where a fixed point is always reached and a dynamically-fluctuating phase have been found. The dynamics when…
We present mathematical techniques for exhaustive studies of long-term dynamics of asynchronous biological system models. Specifically, we extend the notion of $\kappa$-equivalence developed for graph dynamical systems to support systematic…
We study a cyclic Lotka-Volterra model of N interacting species populating a d-dimensional lattice. In the realm of a Kirkwood approximation, a critical number of species N_c(d) above which the system fixates is determined analytically. We…
A system of nonlinear ordinary differential equations with forcing function is developed to model evolution processes in complex systems. In this system R, C, and P are the resource, consumption, and production functions correspondingly. F…
In an ecological context, panel data arise when time series measurements are made on a collection of ecological processes. Each process may correspond to a spatial location for field data, or to an experimental ecosystem in a designed…
We introduce an individual-based model of a complex ecological community with random interactions. The model contains a large number of species, each with a finite population of individuals, subject to discrete reproduction and death…
We study a model of internal waves in an effectively 2D aquarium under periodic forcing. In the case when the underlying classical dynamics has sufficiently irrational rotation number, we prove that the energy of the internal waves remains…
Random dynamical systems (RDS) evolve by a dynamical rule chosen independently with a certain probability, from a given set of deterministic rules. These dynamical systems in an interval reach a steady state with a unique well-defined…
This article shows how to specify and construct a discrete, stochastic, continuous-time model specifically for ecological systems. The model is more broad than typical chemical kinetics models in two ways. First, using time-dependent hazard…
We carry out mathematical analyses, {\em \`{a} la} Helmholtz's and Boltzmann's 1884 studies of monocyclic Newtonian dynamics, for the Lotka-Volterra (LV) equation exhibiting predator-prey oscillations. In doing so a novel "thermodynamic…
Starting from the well-known field theory for directed percolation, we describe an evolving population, near extinction, in an environment with its own nontrivial spatio-temporal dynamics. Here, we consider the special case where the…
We have performed the dynamical system analysis to obtain the critical point in which, the value of the geometric and dynamical parameters satisfy the late-time cosmic behavior of the Universe. At the outset, the modified Friedmann…