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The ability of large language models (LLMs) to follow natural language instructions with human-level fluency suggests many opportunities in healthcare to reduce administrative burden and improve quality of care. However, evaluating LLMs on…

Recent advances in deep learning have resulted in great successes in various applications. Although semi-supervised or unsupervised learning methods have been widely investigated, the performance of deep neural networks highly depends on…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Seong Tae Kim , Farrukh Mushtaq , Nassir Navab

Accurate ground truth estimation in medical screening programs often relies on coalitions of experts and peer second opinions. Algorithms that efficiently aggregate noisy annotations can enhance screening workflows, particularly when data…

Machine Learning · Computer Science 2025-10-07 Tim Bary , Tiffanie Godelaine , Axel Abels , Benoît Macq

Large, high-quality, annotated datasets are the foundation of medical AI research, but constructing even a small, moderate-quality, annotated dataset can take years of effort from multidisciplinary teams. Although active learning can…

Clinical language models are important for many applications in healthcare, but their development depends on access to extensive clinical text for pretraining. However, obtaining clinical notes from electronic health records (EHRs) at scale…

Computation and Language · Computer Science 2024-12-02 Jinghui Liu , Anthony Nguyen

We describe our system for the ArchEHR-QA Shared Task on answering clinical questions using electronic health records (EHRs). Our approach uses large language models in two steps: first, to find sentences in the EHR relevant to a…

Computation and Language · Computer Science 2025-06-09 Sara Shields-Menard , Zach Reimers , Joshua Gardner , David Perry , Anthony Rios

Machine learning has been widely adopted for medical image analysis in recent years given its promising performance in image segmentation and classification tasks. As a data-driven science, the success of machine learning, in particular…

Computer Vision and Pattern Recognition · Computer Science 2020-07-06 Chengliang Dai , Shuo Wang , Yuanhan Mo , Kaichen Zhou , Elsa Angelini , Yike Guo , Wenjia Bai

In recent years, the trend of deploying digital systems in numerous industries has hiked. The health sector has observed an extensive adoption of digital systems and services that generate significant medical records. Electronic health…

Computation and Language · Computer Science 2022-03-01 Neel Kanwal , Giuseppe Rizzo

Information system designers face many challenges w.r.t. selecting appropriate semantic technologies and deciding on a modelling approach for their system. However, there is no clear methodology yet to evaluate "semantically enriched"…

Multimedia · Computer Science 2010-12-10 Jasmin Opitz , Bijan Parsia , Ulrike Sattler

The USA Food and Drug Administration has accorded increasing importance to patient-reported problems in clinical and research settings. In this paper, we explore one of the largest online datasets comprising 170,141 open-ended self-reported…

Computation and Language · Computer Science 2023-05-09 Lakshmi Arbatti , Abhishek Hosamath , Vikram Ramanarayanan , Ira Shoulson

The work discusses the use of machine learning algorithms for anomaly detection in medical image analysis and how the performance of these algorithms depends on the number of annotators and the quality of labels. To address the issue of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-30 Hieu H. Pham , Khiem H. Le , Tuan V. Tran , Ha Q. Nguyen

Human annotators typically provide annotated data for training machine learning models, such as neural networks. Yet, human annotations are subject to noise, impairing generalization performances. Methodological research on approaches…

Computer Vision and Pattern Recognition · Computer Science 2024-07-31 Marek Herde , Denis Huseljic , Lukas Rauch , Bernhard Sick

Answering questions asked from instructional corpora such as E-manuals, recipe books, etc., has been far less studied than open-domain factoid context-based question answering. This can be primarily attributed to the absence of standard…

Computation and Language · Computer Science 2021-09-15 Abhilash Nandy , Soumya Sharma , Shubham Maddhashiya , Kapil Sachdeva , Pawan Goyal , Niloy Ganguly

Clinical question answering systems have the potential to provide clinicians with relevant and timely answers to their questions. Nonetheless, despite the advances that have been made, adoption of these systems in clinical settings has been…

When answering a question, humans utilize the information available across different modalities to synthesize a consistent and complete chain of thought (CoT). This process is normally a black box in the case of deep learning models like…

Computation and Language · Computer Science 2022-10-18 Pan Lu , Swaroop Mishra , Tony Xia , Liang Qiu , Kai-Wei Chang , Song-Chun Zhu , Oyvind Tafjord , Peter Clark , Ashwin Kalyan

Our proposed system FAMULUS helps students learn to diagnose based on automatic feedback in virtual patient simulations, and it supports instructors in labeling training data. Diagnosing is an exceptionally difficult skill to obtain but…

Healthcare data suffers from both noise and lack of ground truth. The cost of data increases as it is cleaned and annotated in healthcare. Unlike other data sets, medical data annotation, which is critical to accurate ground truth, requires…

Signal Processing · Electrical Eng. & Systems 2020-10-13 V. Ratna Saripalli , Gopal Avinash , Dibyajyoti Pati , Michael Potter , Charles W. Anderson

Modern machine learning methods require significant amounts of labelled data, making the preparation process time-consuming and resource-intensive. In this paper, we propose to consider the process of prototyping a tool for annotating and…

Computer Vision and Pattern Recognition · Computer Science 2025-05-26 Nikita Ivanov , Mark Klimov , Dmitry Glukhikh , Tatiana Chernysheva , Igor Glukhikh

Question Answering (QA) is key for making possible a robust communication between human and machine. Modern language models used for QA have surpassed the human-performance in several essential tasks; however, these models require large…

Computation and Language · Computer Science 2021-09-08 Liubov Nikolenko , Pouya Rezazadeh Kalehbasti

Evaluating long-form responses to research queries heavily relies on expert annotators, restricting attention to areas like AI where researchers can conveniently enlist colleagues. Yet, research expertise is abundant: survey articles…

Computation and Language · Computer Science 2025-12-22 Li S. Yifei , Allen Chang , Chaitanya Malaviya , Mark Yatskar
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