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In many scientific and technological contexts we have only a poor understanding of the structure and details of appropriate mathematical models. We often, therefore, need to compare different models. With available data we can use formal…

Algebraic Topology · Mathematics 2021-11-04 Sean T. Vittadello , Michael P. H. Stumpf

We describe a new methodology for studying persistence of topological features across a family of spaces or point-cloud data sets, called zigzag persistence. Building on classical results about quiver representations, zigzag persistence…

Computational Geometry · Computer Science 2008-12-02 Gunnar Carlsson , Vin de Silva

We apply persistent homology, the main method in topological data analysis, to the study of demographic data. Persistence diagrams efficiently summarize information about clusters or peaks in a region's demographic data. To illustrate how…

Algebraic Topology · Mathematics 2023-10-13 Jakini A. Kauba , Thomas Weighill

Critical to the registration of point clouds is the establishment of a set of accurate correspondences between points in 3D space. The correspondence problem is generally addressed by the design of discriminative 3D local descriptors on the…

Computer Vision and Pattern Recognition · Computer Science 2023-02-28 Lei Zhou , Siyu Zhu , Zixin Luo , Tianwei Shen , Runze Zhang , Mingmin Zhen , Tian Fang , Long Quan

Persistent homology computes topological invariants from point cloud data. Recent work has focused on developing statistical methods for data analysis in this framework. We show that, in certain models, parametric inference can be performed…

Quantitative Methods · Quantitative Biology 2014-06-19 Kevin Emmett , Daniel Rosenbloom , Pablo Camara , Raul Rabadan

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

Consider a Poisson point process within a convex set in a Euclidean space. The Vietoris-Rips complex is the clique complex over the graph connecting all pairs of points with distance at most $\delta$. Summing powers of the volume of all…

Probability · Mathematics 2019-12-03 G. Akinwande , M. Reitzner

Topological complexity is a homotopy invariant that measures the minimal number of continuous rules required for motion planning in a space. In this work, we introduce persistent analogs of topological complexity and its cohomological lower…

Algebraic Topology · Mathematics 2025-08-19 Facundo Mémoli , Ling Zhou

The Morse-Smale complex is a standard tool in visual data analysis. The classic definition is based on a continuous view of the gradient of a scalar function where its zeros are the critical points. These points are connected via gradient…

Computational Geometry · Computer Science 2024-09-10 Son Le Thanh , Michael Ankele , Tino Weinkauf

We introduce a new algorithm to parallelise the computation of persistent homology of 2D alpha complexes. Our algorithm distributes the input point cloud among the cores which then compute a cover based on a rectilinear grid. We show how to…

Algebraic Topology · Mathematics 2024-03-04 Freya Jensen , Álvaro Torras-Casas

In this paper we study the properties of the homology of different geometric filtered complexes (such as Vietoris-Rips, Cech and witness complexes) built on top of precompact spaces. Using recent developments in the theory of topological…

Algebraic Topology · Mathematics 2013-11-18 Frederic Chazal , Vin de Silva , Steve Oudot

In this work, we explore links between natural homology and persistent homology for the classification of directed spaces. The former is an algebraic invariant of directed spaces, a semantic model of concurrent programs. The latter was…

Algebraic Topology · Mathematics 2024-08-07 Cameron Calk , Eric Goubault , Philippe Malbos

Processing large point clouds is a challenging task. Therefore, the data is often sampled to a size that can be processed more easily. The question is how to sample the data? A popular sampling technique is Farthest Point Sampling (FPS).…

Computer Vision and Pattern Recognition · Computer Science 2019-04-02 Oren Dovrat , Itai Lang , Shai Avidan

We study the $k$-th nearest neighbor distance function from a finite point-set in $\mathbb{R}^d$. We provide a Morse theoretic framework to analyze the sub-level set topology. In particular, we present a simple combinatorial-geometric…

Computational Geometry · Computer Science 2024-03-20 Yohai Reani , Omer Bobrowski

Persistent homology is a method for computing the topological features present in a given data. Recently, there has been much interest in the integration of persistent homology as a computational step in neural networks or deep learning. In…

Machine Learning · Computer Science 2020-11-17 Padraig Corcoran , Bailin Deng

In the applied algebraic topology community, the persistent homology induced by the Vietoris-Rips simplicial filtration is a standard method for capturing topological information from metric spaces. In this paper, we consider a different,…

Algebraic Topology · Mathematics 2024-04-24 Sunhyuk Lim , Facundo Memoli , Osman Berat Okutan

Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

Topological Data Analysis (TDA) allows us to extract powerful topological and higher-order information on the global shape of a data set or point cloud. Tools like Persistent Homology or the Euler Transform give a single complex description…

Algebraic Topology · Mathematics 2025-11-04 Vincent P. Grande , Michael T. Schaub

Topological Data Analysis (TDA) has been applied with success to solve problems across many scientific disciplines. However, in the setting of a point cloud $X$ sampled from a shape $\mathcal{S}$ of low intrinsic dimension embedded within…

Algebraic Topology · Mathematics 2024-11-18 Jonathan M. Mousley , Paul Bendich

We develop an analysis pipeline for characterizing the topology of large scale structure and extracting cosmological constraints based on persistent homology. Persistent homology is a technique from topological data analysis that quantifies…

Cosmology and Nongalactic Astrophysics · Physics 2021-06-14 Matteo Biagetti , Alex Cole , Gary Shiu