English
Related papers

Related papers: A quick guide for student-driven community genome …

200 papers

Improvements in text generation technologies such as machine translation have necessitated more costly and time-consuming human evaluation procedures to ensure an accurate signal. We investigate a simple way to reduce cost by reducing the…

Computation and Language · Computer Science 2022-04-12 Belén Saldías , George Foster , Markus Freitag , Qijun Tan

This paper is on active learning where the goal is to reduce the data annotation burden by interacting with a (human) oracle during training. Standard active learning methods ask the oracle to annotate data samples. Instead, we take a…

Computer Vision and Pattern Recognition · Computer Science 2017-08-03 Miriam W. Huijser , Jan C. van Gemert

Manual annotation of medical images is a labor-intensive and time-consuming process, posing a significant bottleneck in the development and deployment of robust medical imaging AI systems. This paper introduces a novel hands-free Human-AI…

Image and Video Processing · Electrical Eng. & Systems 2025-07-29 Yizhe Zhang

Human evaluation of machine translation is in an arms race with translation model quality: as our models get better, our evaluation methods need to be improved to ensure that quality gains are not lost in evaluation noise. To this end, we…

Computation and Language · Computer Science 2025-10-29 Parker Riley , Daniel Deutsch , Mara Finkelstein , Colten DiIanni , Juraj Juraska , Markus Freitag

Studies of writing revisions rarely focus on revision quality. To address this issue, we introduce a corpus of between-draft revisions of student argumentative essays, annotated as to whether each revision improves essay quality. We…

Computation and Language · Computer Science 2019-09-13 Tazin Afrin , Diane Litman

Many complex discourse-level tasks can aid domain experts in their work but require costly expert annotations for data creation. To speed up and ease annotations, we investigate the viability of automatically generated annotation…

Information and communications technology and technology-enhanced learning have unquestionably transformed traditional teaching-learning processes and are positioned as key factors to promote quality education, one of the basic sustainable…

Genetic Programming is an evolutionary algorithm that generates computer programs, or mathematical expressions, to solve complex problems. In this Guide, we demonstrate how to use Genetic Programming to develop surrogate models to mitigate…

Creating end-to-end bioinformatics workflows requires diverse domain expertise, which poses challenges for both junior and senior researchers as it demands a deep understanding of both genomics concepts and computational techniques. While…

Traditional image annotation tasks rely heavily on human effort for object selection and label assignment, making the process time-consuming and prone to decreased efficiency as annotators experience fatigue after extensive work. This paper…

Computer Vision and Pattern Recognition · Computer Science 2025-03-17 He Zhang , Xinyi Fu , John M. Carroll

The traditional data annotation process is often labor-intensive, time-consuming, and susceptible to human bias, which complicates the management of increasingly complex datasets. This study explores the potential of large language models…

Computation and Language · Computer Science 2024-09-17 Jianfei Wu , Xubin Wang , Weijia Jia

The way to infer well-supported phylogenetic trees that precisely reflect the evolutionary process is a challenging task that completely depends on the way the related core genes have been found. In previous computational biology studies,…

Modern NLP systems require high-quality annotated data. In specialized domains, expert annotations may be prohibitively expensive. An alternative is to rely on crowdsourcing to reduce costs at the risk of introducing noise. In this paper we…

Computation and Language · Computer Science 2019-05-21 Yinfei Yang , Oshin Agarwal , Chris Tar , Byron C. Wallace , Ani Nenkova

Background: Biological networks have a growing importance for the interpretation of high-throughput omics data. Integrative network analysis makes use of statistical and combinatorial methods to extract smaller subnetwork modules, and…

Computational Engineering, Finance, and Science · Computer Science 2014-07-23 Kasper Dinkla , Mohammed El-Kebir , Cristina-Iulia Bucur , Marco Siderius , Martine J. Smit , Michel A. Westenberg , Gunnar W. Klau

The genome sequence contains the blueprint for governing cellular processes. While the availability of genomes has vastly increased over the last decades, experimental annotation of the various functional, non-coding and regulatory elements…

Genomics · Quantitative Biology 2024-04-10 Frederikke Isa Marin , Felix Teufel , Marc Horlacher , Dennis Madsen , Dennis Pultz , Ole Winther , Wouter Boomsma

Well-annotated datasets, as shown in recent top studies, are becoming more important for researchers than ever before in supervised machine learning (ML). However, the dataset annotation process and its related human labor costs remain…

Computation and Language · Computer Science 2021-08-24 Haozhan Sun , Chenchen Xu , Hanna Suominen

We have seen significant leapfrog advancement in machine learning in recent decades. The central idea of machine learnability lies on constructing learning algorithms that learn from good data. The availability of more data being made…

Computer Vision and Pattern Recognition · Computer Science 2020-08-07 Ng Hui Xian Lynnette , Henry Ng Siong Hock , Nguwi Yok Yen

As Large Language Model (LLM) capabilities advance, the demand for high-quality annotation of exponentially increasing text corpora has outpaced human capacity, leading to the widespread adoption of LLMs in automatic evaluation and…

Computation and Language · Computer Science 2026-04-02 Jiayu Wang , Junyoung Lee

Machine learning is a modern approach to problem-solving and task automation. In particular, machine learning is concerned with the development and applications of algorithms that can recognize patterns in data and use them for predictive…

Segmentation is essential for medical image analysis tasks such as intervention planning, therapy guidance, diagnosis, treatment decisions. Deep learning is becoming increasingly prominent for segmentation, where the lack of annotations,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Firat Ozdemir , Zixuan Peng , Christine Tanner , Philipp Fuernstahl , Orcun Goksel