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Nonnegative matrix factorization (NMF) under the separability assumption can provably be solved efficiently, even in the presence of noise, and has been shown to be a powerful technique in document classification and hyperspectral unmixing.…

Machine Learning · Statistics 2015-04-02 Nicolas Gillis , Stephen A. Vavasis

This paper provides a theoretical support for clustering aspect of the nonnegative matrix factorization (NMF). By utilizing the Karush-Kuhn-Tucker optimality conditions, we show that NMF objective is equivalent to graph clustering…

Machine Learning · Computer Science 2011-12-20 Andri Mirzal

Most network embedding algorithms consist in measuring co-occurrences of nodes via random walks then learning the embeddings using Skip-Gram with Negative Sampling. While it has proven to be a relevant choice, there are alternatives, such…

Computation and Language · Computer Science 2019-03-01 Robin Brochier , Adrien Guille , Julien Velcin

Symmetric nonnegative matrix factorization (SNMF) is equivalent to computing a symmetric nonnegative low rank approximation of a data similarity matrix. It inherits the good data interpretability of the well-known nonnegative matrix…

Numerical Analysis · Computer Science 2017-10-11 Qingjiang Shi , Haoran Sun , Songtao Lu , Mingyi Hong , Meisam Razaviyayn

Modeling the arrival process to an Emergency Department (ED) is the first step of all studies dealing with the patient flow within the ED. Many of them focus on the increasing phenomenon of ED overcrowding, which is afflicting hospitals all…

Optimization and Control · Mathematics 2021-01-28 A. De Santis , T. Giovannelli , S. Lucidi , M. Messedaglia , M. Roma

The nonnegative matrix factorization is a widely used, flexible matrix decomposition, finding applications in biology, image and signal processing and information retrieval, among other areas. Here we present a related matrix factorization.…

Machine Learning · Statistics 2017-12-12 David W Dreisigmeyer

Predicting patient mortality is an important and challenging problem in the healthcare domain, especially for intensive care unit (ICU) patients. Electronic health notes serve as a rich source for learning patient representations, that can…

Computation and Language · Computer Science 2019-10-16 Shaika Chowdhury , Chenwei Zhang , Philip S. Yu , Yuan Luo

Matrix factorization is a fundamental method in statistics and machine learning for inferring and summarizing structure in multivariate data. Modern data sets often come with "side information" of various forms (images, text, graphs) that…

Objective: Clinical trials are essential for advancing pharmaceutical interventions, but they face a bottleneck in selecting eligible participants. Although leveraging electronic health records (EHR) for recruitment has gained popularity,…

Computation and Language · Computer Science 2026-01-15 Mojdeh Rahmanian , Seyed Mostafa Fakhrahmad , Seyedeh Zahra Mousavi

Nonnegative Matrix Factorization (NMF) has been a popular representation method for pattern classification problem. It tries to decompose a nonnegative matrix of data samples as the product of a nonnegative basic matrix and a nonnegative…

Machine Learning · Statistics 2013-12-06 Jim Jing-Yan Wang

We propose a new variant of nonnegative matrix factorization (NMF), combining separability and sparsity assumptions. Separability requires that the columns of the first NMF factor are equal to columns of the input matrix, while sparsity…

Machine Learning · Computer Science 2020-06-16 Nicolas Nadisic , Arnaud Vandaele , Jeremy E. Cohen , Nicolas Gillis

In this work we perform some mathematical analysis on non-negative matrix factorizations (NMF) and apply NMF to some imaging and inverse problems. We will propose a sparse low-rank approximation of big positive data and images in terms of…

Optimization and Control · Mathematics 2015-04-24 Yat Tin Chow , Kazufumi Ito , Jun Zou

Embeddings of medical concepts such as medication, procedure and diagnosis codes in Electronic Medical Records (EMRs) are central to healthcare analytics. Previous work on medical concept embedding takes medical concepts and EMRs as words…

Computation and Language · Computer Science 2018-06-11 Xiangrui Cai , Jinyang Gao , Kee Yuan Ngiam , Beng Chin Ooi , Ying Zhang , Xiaojie Yuan

Nonnegative matrix factorization (NMF) has been shown to be identifiable under the separability assumption, under which all the columns(or rows) of the input data matrix belong to the convex cone generated by only a few of these columns(or…

Machine Learning · Statistics 2014-03-25 Jason Gejie Liu , Shuchin Aeron

Nonnegative matrix factorization (NMF) has become a workhorse for signal and data analytics, triggered by its model parsimony and interpretability. Perhaps a bit surprisingly, the understanding to its model identifiability---the major…

Signal Processing · Electrical Eng. & Systems 2019-03-27 Xiao Fu , Kejun Huang , Nicholas D. Sidiropoulos , Wing-Kin Ma

Interest in unsupervised methods for joint analysis of heterogeneous data sources has risen in recent years. Low-rank latent factor models have proven to be an effective tool for data integration and have been extended to a large number of…

Methodology · Statistics 2024-05-20 Felix Held , Jacob Lindbäck , Rebecka Jörnsten

Nonnegative matrix factorization (NMF) is a linear dimensionality reduction technique for nonnegative data, with applications such as hyperspectral unmixing and topic modeling. NMF is a difficult problem in general (NP-hard), and its…

Numerical Analysis · Mathematics 2025-11-11 Junjun Pan , Valentin Leplat , Michael Ng , Nicolas Gillis

We introduce a new non-negative matrix factorization (NMF) method for ordinal data, called OrdNMF. Ordinal data are categorical data which exhibit a natural ordering between the categories. In particular, they can be found in recommender…

Machine Learning · Computer Science 2020-09-03 Olivier Gouvert , Thomas Oberlin , Cédric Févotte

In this work, we focus on connections between $K$-means clustering approaches and Orthogonal Nonnegative Matrix Factorization (ONMF) methods. We present a novel framework to extract the distance measure and the centroids of the $K$-means…

Numerical Analysis · Mathematics 2021-12-15 Pascal Fernsel , Peter Maass

Topic models uncover latent thematic structures in text corpora, yet evaluating their quality remains challenging, particularly in specialized domains. Existing methods often rely on automated metrics like topic coherence and diversity,…

Computation and Language · Computer Science 2026-03-03 Thibault Prouteau , Francis Lareau , Nicolas Dugué , Jean-Charles Lamirel , Christophe Malaterre