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Visual rendering of graphs is a key task in the mapping of complex network data. Although most graph drawing algorithms emphasize aesthetic appeal, certain applications such as travel-time maps place more importance on visualization of…

Machine Learning · Statistics 2014-01-20 Brian Baingana , Georgios B. Giannakis

In most practical applications of image retrieval, high-dimensional feature vectors are required, but current multi-dimensional indexing structures lose their efficiency with growth of dimensions. Our goal is to propose a divisive…

Information Retrieval · Computer Science 2015-03-13 Najva Izadpanah

Developing an understanding of high-dimensional data can be facilitated by visualizing that data using dimensionality reduction. However, the low-dimensional embeddings are often difficult to interpret. To facilitate the exploration and…

Machine Learning · Computer Science 2025-04-16 Fuyin Lai , Edith Heiter , Guillaume Bied , Jefrey Lijffijt

We present a novel multi-scale embedding scheme that links conventional QM/MM embedding and bootstrap embedding (BE) to allow simulations of large chemical systems on limited quantum devices. We also propose a mixed-basis BE scheme that…

Stochastic Neighbor Embedding (SNE) algorithms like UMAP and tSNE often produce visualizations that do not preserve the geometry of noisy and high dimensional data. In particular, they can spuriously separate connected components of the…

Machine Learning · Computer Science 2025-09-05 Tristan Luca Saidi , Abigail Hickok , Bastian Rieck , Andrew J. Blumberg

The vast majority of Dimensionality Reduction (DR) techniques rely on second-order statistics to define their optimization objective. Even though this provides adequate results in most cases, it comes with several shortcomings. The methods…

Computer Vision and Pattern Recognition · Computer Science 2017-08-21 Nikolaos Passalis , Anastasios Tefas

This paper introduces Diffuse-TreeVAE, a deep generative model that integrates hierarchical clustering into the framework of Denoising Diffusion Probabilistic Models (DDPMs). The proposed approach generates new images by sampling from a…

Machine Learning · Computer Science 2024-07-15 Jorge da Silva Goncalves , Laura Manduchi , Moritz Vandenhirtz , Julia E. Vogt

Deep embedding methods have influenced many areas of unsupervised learning. However, the best methods for learning hierarchical structure use non-Euclidean representations, whereas Euclidean geometry underlies the theory behind many…

Machine Learning · Computer Science 2020-11-02 Jinyu Zhao , Yi Hao , Cyrus Rashtchian

Scatterplots provide a visual representation of bivariate data (or 2D embeddings of multivariate data) that allows for effective analyses of data dependencies, clusters, trends, and outliers. Unfortunately, classical scatterplots suffer…

Human-Computer Interaction · Computer Science 2026-04-16 Hennes Rave , Vladimir Molchanov , Lars Linsen

Neighbor Embedding (NE) aims to preserve pairwise similarities between data items and has been shown to yield an effective principle for data visualization. However, even the best existing NE methods such as Stochastic Neighbor Embedding…

Machine Learning · Computer Science 2021-09-15 Zhirong Yang , Yuwei Chen , Denis Sedov , Samuel Kaski , Jukka Corander

Modeling heterogeneity by extraction and exploitation of high-order information from heterogeneous information networks (HINs) has been attracting immense research attention in recent times. Such heterogeneous network embedding (HNE)…

Machine Learning · Computer Science 2022-01-11 Mubashir Imran , Hongzhi Yin , Tong Chen , Zi Huang , Kai Zheng

Majority of the current dimensionality reduction or retrieval techniques rely on embedding the learned feature representations onto a computable metric space. Once the learned features are mapped, a distance metric aids the bridging of gaps…

Computer Vision and Pattern Recognition · Computer Science 2018-10-17 Muhammad Kamran Janjua , Shah Nawaz , Alessandro Calefati , Ignazio Gallo

We propose an extension of tree-based space-partitioning indexing structures for data with low intrinsic dimensionality embedded in a high dimensional space. We call this extension an Angle Tree. Our extension can be applied to both…

Data Structures and Algorithms · Computer Science 2010-04-19 Ilia Zvedeniouk , Sanjay Chawla

Graph embedding aims at learning a vector-based representation of vertices that incorporates the structure of the graph. This representation then enables inference of graph properties. Existing graph embedding techniques, however, do not…

Hypergraph data, which capture multi-way interactions among entities, are increasingly prevalent in the big data era. Generating new hyperlinks from an observed, usually high-dimensional hypergraph is an important yet challenging task with…

Methodology · Statistics 2026-05-14 Shihao Wu , Junyi Yang , Gongjun Xu , Ji Zhu

Image clustering is one of the most important computer vision applications, which has been extensively studied in literature. However, current clustering methods mostly suffer from lack of efficiency and scalability when dealing with…

Machine Learning · Computer Science 2017-08-10 Kamran Ghasedi Dizaji , Amirhossein Herandi , Cheng Deng , Weidong Cai , Heng Huang

The problem of dimension reduction is of increasing importance in modern data analysis. In this paper, we consider modeling the collection of points in a high dimensional space as a union of low dimensional subspaces. In particular we…

Machine Learning · Statistics 2020-06-12 Weiwei Li , Jan Hannig , Sayan Mukherjee

Dimensionality reduction and clustering techniques are frequently used to analyze complex data sets, but their results are often not easy to interpret. We consider how to support users in interpreting apparent cluster structure on scatter…

Machine Learning · Computer Science 2021-11-08 Xander Vankwikelberge , Bo Kang , Edith Heiter , Jefrey Lijffijt

Network representation learning has exploded recently. However, existing studies usually reconstruct networks as sequences or matrices, which may cause information bias or sparsity problem during model training. Inspired by a cognitive…

Machine Learning · Computer Science 2019-10-01 Jie Bai , Linjing Li , Daniel Zeng

Dimensionality reduction techniques are widely used for visualizing high-dimensional data in two dimensions. Existing methods are typically designed to preserve either local (e.g., $t$-SNE, UMAP) or global (e.g., MDS, PCA) structure of the…

Machine Learning · Computer Science 2026-02-02 Noël Kury , Dmitry Kobak , Sebastian Damrich
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