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Related papers: An Faster Network Motif Detection Tool

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Aiming at better representing multivariate relationships, this paper investigates a motif dimensional framework for higher-order graph learning. The graph learning effectiveness can be improved through OFFER. The proposed framework mainly…

Social and Information Networks · Computer Science 2020-08-31 Shuo Yu , Feng Xia , Jin Xu , Zhikui Chen , Ivan Lee

Many real world networks contain a statistically surprising number of certain subgraphs, called network motifs. In the prevalent approach to motif analysis, network motifs are detected by comparing subgraph frequencies in the original…

Social and Information Networks · Computer Science 2014-11-25 Anatol E. Wegner

Detecting strong ties among users in social and information networks is a fundamental operation that can improve performance on a multitude of personalization and ranking tasks. Strong-tie edges are often readily obtained from the social…

Social and Information Networks · Computer Science 2017-03-28 Rahmtin Rotabi , Krishna Kamath , Jon Kleinberg , Aneesh Sharma

Identifying frequent subgraphs, also called network motifs, is crucial in analyzing and predicting properties of real-world networks. However, finding large commonly-occurring motifs remains a challenging problem not only due to its NP-hard…

Machine Learning · Computer Science 2024-02-23 Rex Ying , Tianyu Fu , Andrew Wang , Jiaxuan You , Yu Wang , Jure Leskovec

Network motifs can capture basic interaction patterns and inform the functional properties of networks. However, real-world complex systems often have multiple types of relationships, which cannot be represented by a monolayer network. The…

Physics and Society · Physics 2019-03-06 Lu Zhong , Qingpeng Zhang , Dong Yang , Guanrong Chen , Shi Yu

This paper looks at the task of network topology inference, where the goal is to learn an unknown graph from nodal observations. One of the novelties of the approach put forth is the consideration of prior information about the density of…

Signal Processing · Electrical Eng. & Systems 2022-07-12 Samuel Rey , T. Mitchell Roddenberry , Santiago Segarra , Antonio G. Marques

Clustering is an essential technique for network analysis, with applications in a diverse range of fields. Although spectral clustering is a popular and effective method, it fails to consider higher-order structure and can perform poorly on…

Social and Information Networks · Computer Science 2020-09-14 William George Underwood , Andrew Elliott , Mihai Cucuringu

Finding dense subnetworks, with density based on edges or more complex structures, such as subgraphs or $k$-cliques, is a fundamental algorithmic problem with many applications. While the problem has been studied extensively in static…

Data Structures and Algorithms · Computer Science 2024-06-26 Ilie Sarpe , Fabio Vandin , Aristides Gionis

Network motifs are small building blocks of complex networks. Statistically significant motifs often perform network-specific functions. However, the precise nature of the connection between motifs and the global structure and function of…

Physics and Society · Physics 2015-03-03 Almerima Jamakovic , Priya Mahadevan , Amin Vahdat , Marian Boguna , Dmitri Krioukov

A deluge of new data on social, technological and biological networked systems suggests that a large number of interactions among system units are not limited to pairs, but rather involve a higher number of nodes. To properly encode such…

Physics and Society · Physics 2023-11-08 Quintino Francesco Lotito , Federico Musciotto , Alberto Montresor , Federico Battiston

Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…

Data Structures and Algorithms · Computer Science 2018-11-07 Pan Li , Gregory J. Puleo , Olgica Milenkovic

In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Data Structures and Algorithms · Computer Science 2015-03-19 Anton Dries , Siegfried Nijssen

Over the last two decades, network theory has shown to be a fruitful paradigm in understanding the organization and functioning of real-world complex systems. One technique helpful to this endeavor is identifying functionally influential…

Physics and Society · Physics 2022-01-24 Francesco Picciolo , Franco Ruzzenenti , Petter Holme , Rossana Mastrandrea

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

Data series motif discovery represents one of the most useful primitives for data series mining, with applications to many domains, such as robotics, entomology, seismology, medicine, and climatology, and others. The state-of-the-art motif…

Databases · Computer Science 2020-09-01 Michele Linardi , Yan Zhu , Themis Palpanas , Eamonn Keogh

Physical and functional constraints on biological networks lead to complex topological patterns across multiple scales in their organization. A particular type of higher-order network feature that has received considerable interest is…

Quantitative Methods · Quantitative Biology 2024-10-15 Alexis Bénichou , Jean-Baptiste Masson , Christian L. Vestergaard

The randomized technique of color coding is behind state-of-the-art algorithms for estimating graph motif counts. Those algorithms, however, are not yet capable of scaling well to very large graphs with billions of edges. In this paper we…

Databases · Computer Science 2019-06-05 Marco Bressan , Stefano Leucci , Alessandro Panconesi

Recent years have witnessed a surge of interest in machine learning on graphs and networks with applications ranging from vehicular network design to IoT traffic management to social network recommendations. Supervised machine learning…

Social and Information Networks · Computer Science 2019-08-23 Manoj Reddy Dareddy , Mahashweta Das , Hao Yang

Motif discovery in DNA sequences is a challenging task in molecular biology. In computational motif discovery, Planted (l, d) motif finding is a widely studied problem and numerous algorithms are available to solve it. Both hardware and…

Computational Engineering, Finance, and Science · Computer Science 2014-03-07 P. Perera , R. G. Ragel

Analyzing and characterizing the differences between networks is a fundamental and challenging problem in network science. Previously, most network comparison methods that rely on topological properties have been restricted to measuring…

Physics and Society · Physics 2024-01-15 Chenwei Xie , Qiao Ke , Haoyu Chen , Chuang Liu , Xiu-Xiu Zhan