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Graphs are a generalized concept that encompasses more complex data structures than trees, such as difference lists, doubly-linked lists, skip lists, and leaf-linked trees. Normally, these structures are handled with destructive assignments…

Programming Languages · Computer Science 2022-09-13 Jin Sano , Naoki Yamamoto , Kazunori Ueda

Fragment-based shape signature techniques have proven to be powerful tools for computer-aided drug design. They allow scientists to search for target molecules with some similarity to a known active compound. They do not require reference…

Artificial Intelligence · Computer Science 2022-01-05 Thierry Petit , Randy J. Zauhar

An important question in the study of constraint satisfaction problems (CSP) is understanding how the graph or hypergraph describing the incidence structure of the constraints influences the complexity of the problem. For binary CSP…

Data Structures and Algorithms · Computer Science 2015-03-13 Dániel Marx

Constraint Handling Rules (CHR) is both an effective concurrent declarative constraint-based programming language and a versatile computational formalism. While conceptually simple, CHR is distinguished by a remarkable combination of…

Programming Languages · Computer Science 2017-01-11 Thom Fruehwirth

Control-flow graphs (CFGs) of structured programs are well known to exhibit strong sparsity properties. Traditionally, this sparsity has been modeled using graph parameters such as treewidth and pathwidth, enabling the development of faster…

Programming Languages · Computer Science 2026-02-10 Xuran Cai , Amir Goharshady , S Hitarth , Chun Kit Lam

We propose a universal Graph Neural Network architecture which can be trained as an end-2-end search heuristic for any Constraint Satisfaction Problem (CSP). Our architecture can be trained unsupervised with policy gradient descent to…

Artificial Intelligence · Computer Science 2022-08-23 Jan Tönshoff , Berke Kisin , Jakob Lindner , Martin Grohe

[Context] Modern AI applications increasingly process highly structured data, such as 3D meshes and point clouds, where test input generation must preserve both structural and semantic validity. However, existing fuzzing tools and input…

Software Engineering · Computer Science 2025-07-30 Zhaorui Yang , Yuxin Qiu , Haichao Zhu , Qian Zhang

In this paper, we consider the setting of graph-structured data that evolves as a result of operations carried out by users or applications. We study different reasoning problems, which range from ensuring the satisfaction of a given set of…

Artificial Intelligence · Computer Science 2014-05-30 Shqiponja Ahmetaj , Diego Calvanese , Magdalena Ortiz , Mantas Simkus

We describe and analyze algorithms for shape-constrained symbolic regression, which allows the inclusion of prior knowledge about the shape of the regression function. This is relevant in many areas of engineering -- in particular whenever…

Neural and Evolutionary Computing · Computer Science 2021-07-21 Christian Haider , Fabricio Olivetti de França , Bogdan Burlacu , Gabriel Kronberger

Access control is the enforcement of the authorization policy, which defines subjects, resources, and access rights. Graph-structured data requires advanced, flexible, and fine-grained access control due to its complex structure as…

Cryptography and Security · Computer Science 2024-06-03 Aya Mohamed , Dagmar Auer , Daniel Hofer , Josef Kueng

This study explores the effectiveness of graph neural networks (GNNs) for vulnerability detection in software code, utilizing a real-world dataset of Java vulnerability-fixing commits. The dataset's structure, based on the number of…

Cryptography and Security · Computer Science 2024-06-19 Ravil Mussabayev

We observe that the various formulations of the operational semantics of Constraint Handling Rules proposed over the years fall into a spectrum ranging from the analytical to the pragmatic. While existing analytical formulations facilitate…

Logic in Computer Science · Computer Science 2010-07-23 Hariolf Betz , Frank Raiser , Thom Frühwirth

Catamorphisms are functions that are recursively defined on list and trees and, in general, on Algebraic Data Types (ADTs), and are often used to compute suitable abstractions of programs that manipulate ADTs. Examples of catamorphisms…

Logic in Computer Science · Computer Science 2025-02-19 Emanuele De Angelis , Fabio Fioravanti , Alberto Pettorossi , Maurizio Proietti

One of the main challenges in the verification of software systems is the analysis of unbounded data structures with dynamic memory allocation, such as linked data structures and arrays. We describe Bohne, a new analysis for verifying data…

Programming Languages · Computer Science 2007-05-23 Thomas Wies , Viktor Kuncak , Karen Zee , Andreas Podelski , Martin Rinard

It is a strength of graph-based data formats, like RDF, that they are very flexible with representing data. To avoid run-time errors, program code that processes highly-flexible data representations exhibits the difficulty that it must…

Programming Languages · Computer Science 2019-07-02 Martin Leinberger , Philipp Seifer , Claudia Schon , Ralf Lämmel , Steffen Staab

Optimizing compilers are mainly equipped to optimize control flow. The optimization of data structures is left to the programmer and it is the programmer's responsibility to design the data structures to suit the target hardware. Very…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-15 K. F. D. Rietveld , H. A. G. Wijshoff

Learning the dependence structure among variables in complex systems is a central problem across medical, natural, and social sciences. These structures can be naturally represented by graphs, and the task of inferring such graphs from data…

Methodology · Statistics 2026-04-02 Lucas Kook , Søren Wengel Mogensen

We propose a kernel-based nonparametric framework for mean-variance optimization that enables inference on economically motivated shape constraints in finance, including positivity, monotonicity, and convexity. Many central hypotheses in…

Machine Learning · Statistics 2026-01-26 Rohan Sen

Graph-structured data is ubiquitous in scientific domains, where models often face imbalanced learning settings. In imbalanced regression, domain preferences focus on specific target value ranges that represent the most scientifically…

Machine Learning · Computer Science 2025-07-15 Brenda Nogueira , Gabe Gomes , Meng Jiang , Nitesh V. Chawla , Nuno Moniz

In many real-world applications, graph-structured data used for training and testing have differences in distribution, such as in high energy physics (HEP) where simulation data used for training may not match real experiments. Graph domain…

Machine Learning · Computer Science 2023-06-07 Shikun Liu , Tianchun Li , Yongbin Feng , Nhan Tran , Han Zhao , Qiu Qiang , Pan Li