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Learning interpretable representations of neural dynamics at a population level is a crucial first step to understanding how observed neural activity relates to perception and behavior. Models of neural dynamics often focus on either…

Machine Learning · Statistics 2025-01-13 Noga Mudrik , Yenho Chen , Eva Yezerets , Christopher J. Rozell , Adam S. Charles

Probabilistic atlas priors have been commonly used to derive adaptive and robust brain MRI segmentation algorithms. Widely-used neuroimage analysis pipelines rely heavily on these techniques, which are often computationally expensive. In…

Computer Vision and Pattern Recognition · Computer Science 2019-07-24 Adrian V. Dalca , Evan Yu , Polina Golland , Bruce Fischl , Mert R. Sabuncu , Juan Eugenio Iglesias

The study of dynamic functional connectomes has provided valuable insights into how patterns of brain activity change over time. Neural networks process information through artificial neurons, conceptually inspired by patterns of activation…

Neurons and Cognition · Quantitative Biology 2025-08-12 Yutong Wu , Peilin He , Tananun Songdechakraiwut

Brain tumors in magnetic resonance imaging (MR) are difficult, time-consuming, and prone to human error. These challenges can be resolved by developing automatic brain tumor segmentation methods from MR images. Various deep-learning models…

Image and Video Processing · Electrical Eng. & Systems 2024-08-23 Subin Sahayam , John Michael Sujay Zakkam , Yoga Sri Varshan , Umarani Jayaraman

Various architectures (such as GoogLeNets, ResNets, and DenseNets) have been proposed. However, the existing networks usually suffer from either redundancy of convolutional layers or insufficient utilization of parameters. To handle these…

Computer Vision and Pattern Recognition · Computer Science 2020-04-27 Zhiyu Zhu , Zhen-Peng Bian , Junhui Hou , Yi Wang , Lap-Pui Chau

Recently, tremendous human-designed and automatically searched neural networks have been applied to image denoising. However, previous works intend to handle all noisy images in a pre-defined static network architecture, which inevitably…

Computer Vision and Pattern Recognition · Computer Science 2021-10-19 Zutao Jiang , Changlin Li , Xiaojun Chang , Jihua Zhu , Yi Yang

Multimodal learning robust to missing modality has attracted increasing attention due to its practicality. Existing methods tend to address it by learning a common subspace representation for different modality combinations. However, we…

Computer Vision and Pattern Recognition · Computer Science 2024-07-08 Shicai Wei , Yang Luo , Yuji Wang , Chunbo Luo

Image reconstruction from undersampled k-space data plays an important role in accelerating the acquisition of MR data, and a lot of deep learning-based methods have been exploited recently. Despite the achieved inspiring results, the…

Computer Vision and Pattern Recognition · Computer Science 2021-09-28 Chen Hu , Cheng Li , Haifeng Wang , Qiegen Liu , Hairong Zheng , Shanshan Wang

Magnetic Resonance Imaging (MRI) is widely used in clinical practice, but suffered from prolonged acquisition time. Although deep learning methods have been proposed to accelerate acquisition and demonstrate promising performance, they rely…

Image and Video Processing · Electrical Eng. & Systems 2025-12-30 Hao Zhang , Qi Wang , Jian Sun , Zhijie Wen , Jun Shi , Shihui Ying

Deep neural network (DNN) models have demonstrated impressive performance in various domains, yet their application in cognitive neuroscience is limited due to their lack of interpretability. In this study we employ two structurally…

Signal Processing · Electrical Eng. & Systems 2024-09-04 Murat Kucukosmanoglu , Javier O. Garcia , Justin Brooks , Kanika Bansal

Recurrent Neural Networks (RNNs) are popular models of brain function. The typical training strategy is to adjust their input-output behavior so that it matches that of the biological circuit of interest. Even though this strategy ensures…

Neurons and Cognition · Quantitative Biology 2020-11-09 Alessandro Salatiello , Martin A. Giese

A deep learning approach to blind denoising of images without complete knowledge of the noise statistics is considered. We propose DN-ResNet, which is a deep convolutional neural network (CNN) consisting of several residual blocks…

Image and Video Processing · Electrical Eng. & Systems 2019-04-12 Haoyu Ren , Mostafa El-Khamy , Jungwon Lee

Speech encodes a wealth of information related to human behavior and has been used in a variety of automated behavior recognition tasks. However, extracting behavioral information from speech remains challenging including due to inadequate…

Audio and Speech Processing · Electrical Eng. & Systems 2021-04-09 Haoqi Li , Brian Baucom , Shrikanth Narayanan , Panayiotis Georgiou

We propose a method to facilitate exploration and analysis of new large data sets. In particular, we give an unsupervised deep learning approach to learning a latent representation that captures semantic similarity in the data set. The core…

Computer Vision and Pattern Recognition · Computer Science 2020-12-23 Gary B Huang , Huei-Fang Yang , Shin-ya Takemura , Pat Rivlin , Stephen M Plaza

Deep neural networks demonstrated their ability to provide remarkable performances on a wide range of supervised learning tasks (e.g., image classification) when trained on extensive collections of labeled data (e.g., ImageNet). However,…

Machine Learning · Computer Science 2020-07-07 Yassine Ouali , Céline Hudelot , Myriam Tami

Purpose: To develop a strategy for training a physics-guided MRI reconstruction neural network without a database of fully-sampled datasets. Theory and Methods: Self-supervised learning via data under-sampling (SSDU) for physics-guided deep…

Image and Video Processing · Electrical Eng. & Systems 2020-07-06 Burhaneddin Yaman , Seyed Amir Hossein Hosseini , Steen Moeller , Jutta Ellermann , Kâmil Uğurbil , Mehmet Akçakaya

Recent advances in self-supervised learning have attracted significant attention from both machine learning and neuroscience. This is primarily because self-supervised methods do not require annotated supervisory information, making them…

Neurons and Cognition · Quantitative Biology 2025-12-05 Asaki Kataoka , Yoshihiro Nagano , Masafumi Oizumi

A network supporting deep unsupervised learning is presented. The network is an autoencoder with lateral shortcut connections from the encoder to decoder at each level of the hierarchy. The lateral shortcut connections allow the higher…

Machine Learning · Statistics 2015-02-03 Harri Valpola

In this paper, we propose a novel multi-task learning method based on the deep convolutional network. The proposed deep network has four convolutional layers, three max-pooling layers, and two parallel fully connected layers. To adjust the…

Machine Learning · Computer Science 2019-04-17 Fang Su , Hai-Yang Shang , Jing-Yan Wang

Purpose: To develop a deep learning method on a nonlinear manifold to explore the temporal redundancy of dynamic signals to reconstruct cardiac MRI data from highly undersampled measurements. Methods: Cardiac MR image reconstruction is…

Image and Video Processing · Electrical Eng. & Systems 2021-04-05 Ziwen Ke , Zhuo-Xu Cui , Wenqi Huang , Jing Cheng , Sen Jia , Haifeng Wang , Xin Liu , Hairong Zheng , Leslie Ying , Yanjie Zhu , Dong Liang
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