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We study coding schemes for error correction in interactive communications. Such interactive coding schemes simulate any $n$-round interactive protocol using $N$ rounds over an adversarial channel that corrupts up to $\rho N$ transmissions.…

Data Structures and Algorithms · Computer Science 2014-04-17 Mohsen Ghaffari , Bernhard Haeupler

Motivated by applications in in-vivo DNA storage, we study codes for correcting duplications. A reverse-complement duplication of length $k$ is the insertion of the reversed and complemented copy of a substring of length $k$ adjacent to its…

Information Theory · Computer Science 2026-02-03 Yubo Sun , Gennian Ge

One of the main challenges in developing racetrack memory systems is the limited precision in controlling the track shifts, that in turn affects the reliability of reading and writing the data. A current proposal for combating deletions in…

Information Theory · Computer Science 2022-07-19 Jin Sima , Jehoshua Bruck

Recently, codes for correcting a burst of errors have attracted significant attention. One of the most important reasons is that bursts of errors occur in certain emerging techniques, such as DNA storage. In this paper, we investigate a…

Information Theory · Computer Science 2025-01-20 Yubo Sun , Ziyang Lu , Yiwei Zhang , Gennian Ge

In the decades-old Pattern Matching with Edits problem, given a length-$n$ string $T$ (the text), a length-$m$ string $P$ (the pattern), and a positive integer $k$ (the threshold), the task is to list the $k$-error occurrences of $P$ in…

Data Structures and Algorithms · Computer Science 2026-04-20 Tomasz Kociumaka , Jakob Nogler , Philip Wellnitz

This paper extends the foundational work of Dollma \emph{et al}. on codes for ordered composite DNA sequences. We consider the general setting with an alphabet of size $q$ and a resolution parameter $k$, moving beyond the binary ($q=2$)…

Information Theory · Computer Science 2026-02-19 Zuo Ye , Yuling Li , Zhaojun Lan , Gennian Ge

The problem of correcting deletions has received significant attention, partly because of the prevalence of these errors in DNA data storage. In this paper, we study the problem of correcting a consecutive burst of at most $t$ deletions in…

Information Theory · Computer Science 2022-10-24 Shuche Wang , Yuanyuan Tang , Jin Sima , Ryan Gabrys , Farzad Farnoud

We consider communication over binary-input memoryless output-symmetric channels using low-density parity-check codes and message-passing decoding. The asymptotic (in the length) performance of such a combination for a fixed number of…

Information Theory · Computer Science 2008-02-12 Satish Babu Korada , Ruediger Urbanke

We show that in the document exchange problem, where Alice holds $x \in \{0,1\}^n$ and Bob holds $y \in \{0,1\}^n$, Alice can send Bob a message of size $O(K(\log^2 K+\log n))$ bits such that Bob can recover $x$ using the message and his…

Data Structures and Algorithms · Computer Science 2016-07-15 Djamal Belazzougui , Qin Zhang

We study the $k$-edge connectivity problem on undirected graphs in the distributed sketching model, where we have $n$ nodes and a referee. Each node sends a single message to the referee based on its 1-hop neighborhood in the graph, and the…

Data Structures and Algorithms · Computer Science 2026-02-10 Peter Robinson , Ming Ming Tan

Consider two or more strings $\mathbf{x}^1,\mathbf{x}^2,\ldots,$ that are concatenated to form $\mathbf{x}=\langle \mathbf{x}^1,\mathbf{x}^2,\ldots \rangle$. Suppose that up to $\delta$ deletions occur in each of the concatenated strings.…

Information Theory · Computer Science 2023-04-20 Serge Kas Hanna

In interactive coding, Alice and Bob wish to compute some function $f$ of their individual private inputs $x$ and $y$. They do this by engaging in a non-adaptive (fixed order, fixed length) protocol to jointly compute $f(x,y)$. The goal is…

Data Structures and Algorithms · Computer Science 2021-11-09 Meghal Gupta , Rachel Yun Zhang

Insertion-deletion codes (insdel codes for short) play an important role in synchronization error correction. The higher the minimum insdel distance, the more insdel errors the code can correct. Haeupler and Shahrasbi established the…

Information Theory · Computer Science 2021-05-06 Bocong Chen , Guanghui Zhang

Insdel errors occur in communication systems caused by the loss of positional information of the message. Since the work by Guruswami and Wang, there have been some further investigations on the list decoding of insertion codes, deletion…

Information Theory · Computer Science 2020-09-30 Shu Liu , Ivan Tjuawinata , Chaoping Xing

We study optimal reconstruction codes over the multiple-burst substitution channel. Our main contribution is establishing a trade-off between the error-correction capability of the code, the number of reads used in the reconstruction…

Information Theory · Computer Science 2025-06-17 Wenjun Yu , Yubo Sun , Zixiang Xu , Gennian Ge , Moshe Schwartz

Codes correcting bursts of deletions and localized deletions have garnered significant research interest in recent years. One of the primary objectives is to construct codes with minimal redundancy. Currently, the best known constructions…

Information Theory · Computer Science 2025-07-08 Zuo Ye , Yubo Sun , Gennian Ge

This paper gives some theory and efficient design of binary block systematic codes capable of controlling the deletions of the symbol ``$0$'' (referred to as $0$-deletions) and/or the insertions of the symbol ``$0$'' (referred to as…

Information Theory · Computer Science 2023-02-14 Luca G. Tallini , Nawaf Alqwaifly , Bella Bose

In this paper we explore fundamental problems in randomized communication complexity such as computing Set Intersection on sets of size $k$ and Equality Testing between vectors of length $k$. Sa\u{g}lam and Tardos and Brody et al. showed…

Information Theory · Computer Science 2020-05-21 Dawei Huang , Seth Pettie , Yixiang Zhang , Zhijun Zhang

Estimating quantiles is one of the foundational problems of data sketching. Given $n$ elements $x_1, x_2, \dots, x_n$ from some universe of size $U$ arriving in a data stream, a quantile sketch estimates the rank of any element with…

Data Structures and Algorithms · Computer Science 2024-04-08 Meghal Gupta , Mihir Singhal , Hongxun Wu

The problem of error correction in both coherent and noncoherent network coding is considered under an adversarial model. For coherent network coding, where knowledge of the network topology and network code is assumed at the source and…

Information Theory · Computer Science 2019-05-07 Danilo Silva , Frank R. Kschischang