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Computational notebooks have become the tool of choice for many data scientists and practitioners for performing analyses and disseminating results. Despite their increasing popularity, the research community cannot yet count on a large,…

Databases · Computer Science 2021-06-01 Luigi Quaranta , Fabio Calefato , Filippo Lanubile

Reusing and making sense of other scientists' computational notebooks. However, making sense of existing notebooks is a struggle, as these reference notebooks are often exploratory, have messy structures, include multiple alternatives, and…

Human-Computer Interaction · Computer Science 2023-12-19 Souti Chattopadhyay , Zixuan Feng , Emily Arteaga , Audrey Au , Gonzalo Ramos , Titus Barik , Anita Sarma

In this paper we describe the development and evaluation of AITK, the Artificial Intelligence Toolkit. This open-source project contains both Python libraries and computational essays (Jupyter notebooks) that together are designed to allow…

Computers and Society · Computer Science 2025-01-22 Levin Ho , Morgan McErlean , Zehua You , Douglas Blank , Lisa Meeden

Computational micromagnetics has become an essential tool in academia and industry to support fundamental research and the design and development of devices. Consequently, computational micromagnetics is widely used in the community, and…

Computational Physics · Physics 2021-05-19 Marijan Beg , Martin Lang , Hans Fangohr

Keeping abreast of current trends, technologies, and best practices in visualization and data analysis is becoming increasingly difficult, especially for fledgling data scientists. In this paper, we propose Lodestar, an interactive…

Human-Computer Interaction · Computer Science 2022-04-19 Deepthi Raghunandan , Zhe Cui , Kartik Krishnan , Segen Tirfe , Shenzhi Shi , Tejaswi Darshan Shrestha , Leilani Battle , Niklas Elmqvist

The purpose of this work is to highlight the content of the Microsoft Recommenders repository and show how it can be used to reduce the time involved in developing recommender systems. The open source repository provides python utilities to…

Information Retrieval · Computer Science 2020-09-01 Scott Graham , Jun-Ki Min , Tao Wu

Computational notebook software such as Jupyter Notebook is popular for data science tasks. Numerous computational notebooks are available on the Web and reusable; however, searching for computational notebooks manually is a tedious task,…

Information Retrieval · Computer Science 2022-02-01 Misato Horiuchi , Yuya Sasaki , Chuan Xiao , Makoto Onizuka

Freely and openly shared low-cost electronic applications, known as open electronics, have sparked a new open-source movement, with much un-tapped potential to advance scientific research. Initially designed to appeal to electronic…

Quantitative Methods · Quantitative Biology 2022-07-14 Michael Oellermann , Jolle W. Jolles , Diego Ortiz , Rui Seabra , Tobias Wenzel , Hannah Wilson , Richelle Tanner

The sharing and citation of research data is becoming increasingly recognized as an essential building block in scientific research across various fields and disciplines. Sharing research data allows other researchers to reproduce results,…

Digital Libraries · Computer Science 2023-09-22 Tim Conrad , Eloi Ferrer , Daniel Mietchen , Larissa Pusch , Johannes Stegmuller , Moritz Schubotz

Semantic search, a process aimed at delivering highly relevant search results by comprehending the searcher's intent and the contextual meaning of terms within a searchable dataspace, plays a pivotal role in information retrieval. In this…

Information Retrieval · Computer Science 2024-02-21 Lan Li , Jinpeng Lv

The Open Access movement in scientific publishing and search engines like Google Scholar have made scientific articles more broadly accessible. During the last decade, the availability of scientific papers in full text has become more and…

Digital Libraries · Computer Science 2015-05-07 Iana Atanassova , Marc Bertin , Philipp Mayr

We report a case study where an existing materials science course was modified to include numerical simulation projects on the micromagnetic behavior of materials. The Ubermag micromagnetic simulation software package is used in order to…

Jupyter Notebook is an interactive development environment commonly used for rapid experimentation of machine learning (ML) solutions. Describing the ML activities performed along code cells improves the readability and understanding of…

Software Engineering · Computer Science 2024-03-13 Miguel Perez , Selin Aydin , Horst Lichter

In the Jupyter ecosystem, data visualization is usually done with "widgets" created as notebook cell outputs. While this mechanism works well in some circumstances, it is not well-suited to presenting interfaces that are long-lived,…

Instrumentation and Methods for Astrophysics · Physics 2022-12-09 Peter K. G. Williams , Jonathan Carifio , Henrik Norman , A. David Weigel

Engaging students in teaching foundational Computer Science concepts is vital for the student's continual success in more advanced topics in the field. An idea of a series of Jupyter notebooks was conceived as a way of using Bloom's…

Computers and Society · Computer Science 2018-01-19 Christopher A. Birster

The quality of scientific code is a critical concern for the research community. Poorly written code can result in irreproducible results, incorrect findings, and slower scientific progress. In this study, we evaluate scientific code…

Software Engineering · Computer Science 2026-03-25 Shun Kashiwa , Ayla Kurdak , Savitha Ravi , Ridhi Srikanth , Angel Thakur , Sonia Chandra , Jonathan Truong , Michael Coblenz

Computational notebooks are widely used for data analysis. Their interleaved displays of code and execution results (e.g., visualizations) are welcomed since they enable iterative analysis and preserve the exploration process. However, the…

Human-Computer Interaction · Computer Science 2023-03-08 Haotian Li , Lu Ying , Haidong Zhang , Yingcai Wu , Huamin Qu , Yun Wang

Computers have profoundly changed the way scientific research is done. Whereas the importance of computers as research tools is evident to everyone, the impact of the digital revolution on the representation of scientific knowledge is not…

Physics and Society · Physics 2016-05-11 Konrad Hinsen

More than ninety percent of published Jupyter notebooks do not state dependencies on external packages. This makes them non-executable and thus hinders reproducibility of scientific results. We present SnifferDog, an approach that 1)…

Software Engineering · Computer Science 2021-03-05 Jiawei Wang , Li Li , Andreas Zeller

Scientific software is one of the key elements for reproducible research. However, classic publications and related scientific software are typically not (sufficiently) linked, and it lacks tools to jointly explore these artefacts. In this…

Digital Libraries · Computer Science 2018-06-21 Anett Hoppe , Jascha Hagen , Helge Holzmann , Günter Kniesel , Ralph Ewerth