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We propose a new segmentation model combining common regularization energies, e.g. Markov Random Field (MRF) potentials, and standard pairwise clustering criteria like Normalized Cut (NC), average association (AA), etc. These clustering and…

Computer Vision and Pattern Recognition · Computer Science 2016-09-22 Meng Tang , Dmitrii Marin , Ismail Ben Ayed , Yuri Boykov

We introduce a general class of algorithms and supply a number of general results useful for analysing these algorithms when applied to regular graphs of large girth. As a result, we can transfer a number of results proved for random…

Combinatorics · Mathematics 2017-03-06 Carlos Hoppen , Nicholas Wormald

Random forests (RFs) are among the most popular supervised learning algorithms due to their nonlinear flexibility and ease-of-use. However, as black box models, they can only be interpreted via algorithmically-defined feature importance…

Methodology · Statistics 2025-05-26 Abhineet Agarwal , Ana M. Kenney , Yan Shuo Tan , Tiffany M. Tang , Bin Yu

We present an efficient computational approach to perform real-space electronic structure calculations using an adaptive higher-order finite-element discretization of Kohn-Sham density-functional theory (DFT). To this end, we develop an…

Computational Physics · Physics 2015-06-05 Phani Motamarri , Michael R Nowak , Kenneth Leiter , Jaroslaw Knap , Vikram Gavini

Flexibility-rigidity index (FRI) has been developed as a robust, accurate and efficient method for macromolecular thermal fluctuation analysis and B-factor prediction. The performance of FRI depends on its formulations of rigidity index and…

Biomolecules · Quantitative Biology 2016-09-15 Duc Duy Nguyen , Kelin Xia , Guo-Wei Wei

This paper introduces a design method for densergraph-frequency graph Fourier frames (DGFFs) to enhance graph signal processing and analysis. The graph Fourier transform (GFT) enables us to analyze graph signals in the graph spectral domain…

Signal Processing · Electrical Eng. & Systems 2025-03-18 Kaito Nitani , Seisuke Kyochi

A challenge in modeling time-dependent strong-field processes such as high-harmonic generation for many-body systems, is how to effectively represent the electronic continuum. We apply Rothe's method to the time-dependent Hartree-Fock…

Chemical Physics · Physics 2025-08-22 Simon Elias Schrader , Håkon Emil Kristiansen , Thomas Bondo Pedersen , Simen Kvaal

Standard gradient-based iteration algorithms for optimization, such as gradient descent and its various proximal-based extensions to nonsmooth problems, are known to converge slowly for ill-conditioned problems, sometimes requiring many…

Numerical Analysis · Mathematics 2026-03-24 G. H. M. Araújo , O. A. Krzysik , H. De Sterck

In geostatistics, traditional spatial models often rely on the Gaussian Process (GP) to fit stationary covariances to data. It is well known that this approach becomes computationally infeasible when dealing with large data volumes,…

Computation · Statistics 2024-09-17 Antony Sikorski , Daniel McKenzie , Douglas Nychka

Elliptic curve cryptography (ECC) has emerged as the dominant public-key protocol, with NIST standardizing parameters for binary field GF(2^m) ECC systems. This work presents a hardware implementation of a Hybrid Multiplication technique…

Cryptography and Security · Computer Science 2025-06-25 Ruby Kumari , Gaurav Purohit , Abhijit Karmakar

Distributed algorithms to solve linear equations in multi-agent networks have attracted great research attention and many iteration-based distributed algorithms have been developed. The convergence speed is a key factor to be considered for…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-30 Haodi Ping , Yongcai Wang , Deying Li

Dynamical mean-field theory (DMFT) is a cornerstone technique for studying strongly correlated electronic systems. However, each DMFT step is computationally demanding, and many iterations can be required to achieve convergence. Here, we…

Strongly Correlated Electrons · Physics 2026-01-26 E. M. Makaresz , O. Gingras , Tsung-Han Lee , Nicola Lanatà , B. J. Powell , Henry L. Nourse

We investigate the impact of choosing regressors and molecular representations for the construction of fast machine learning (ML) models of thirteen electronic ground-state properties of organic molecules. The performance of each…

This paper develops new combinatorial approaches to analyze and compute special set partitions, called complementary set partitions, which are fundamental in the study of generalized cumulants. Moving away from traditional graph-based and…

Statistics Theory · Mathematics 2025-05-20 Elvira Di Nardo , Giuseppe Guarino

The modified Gram-Schmidt (MGS) orthogonalization is one of the most well-used algorithms for computing the thin QR factorization. MGS can be straightforwardly extended to a non-standard inner product with respect to a symmetric positive…

Numerical Analysis · Mathematics 2017-03-31 Akira Imakura , Yusaku Yamamoto

Many disciplines of science and engineering deal with problems related to compositions, ranging from chemical compositions in materials science to portfolio compositions in economics. They exist in non-Euclidean simplex spaces, causing many…

Materials Science · Physics 2024-11-06 Adam M. Krajewski , Allison M. Beese , Wesley F. Reinhart , Zi-Kui Liu

The implementation of an efficient self-consistent field (SCF) method including both scalar relativistic effects and spin-orbit interaction in density functional theory (DFT) is presented. We make use of Gaussian-type orbitals (GTOs) and…

Chemical Physics · Physics 2024-05-03 Yannick J. Franzke , Werner M. Schosser , Fabian Pauly

With the growing reliance of modern supercomputers on accelerator-based architectures such a GPUs, the development and optimization of electronic structure methods to exploit these massively parallel resources has become a recent priority.…

We present an efficient real space formalism for hybrid exchange-correlation functionals in generalized Kohn-Sham density functional theory (DFT). In particular, we develop an efficient representation for any function of the real space…

Computational Physics · Physics 2024-06-26 Xin Jing , Phanish Suryanarayana

The multivariate generalized Gaussian distribution (MGGD), also known as the multivariate exponential power (MEP) distribution, is widely used in signal and image processing. However, estimating MGGD parameters, which is required in…

Methodology · Statistics 2023-12-13 Nora Ouzir , Frédéric Pascal , Jean-Christophe Pesquet