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Longitudinal datasets measured repeatedly over time from individual subjects, arise in many biomedical, psychological, social, and other studies. A common approach to analyse high-dimensional data that contains missing values is to learn a…

Machine Learning · Statistics 2021-04-21 Siddharth Ramchandran , Gleb Tikhonov , Kalle Kujanpää , Miika Koskinen , Harri Lähdesmäki

Finding an interpretable non-redundant representation of real-world data is one of the key problems in Machine Learning. Biological neural networks are known to solve this problem quite well in unsupervised manner, yet unsupervised…

Machine Learning · Computer Science 2020-10-13 Denis Kuzminykh , Laida Kushnareva , Timofey Grigoryev , Alexander Zatolokin

Variational autoencoders (VAEs) are widely used deep generative models capable of learning unsupervised latent representations of data. Such representations are often difficult to interpret or control. We consider the problem of…

Machine Learning · Computer Science 2018-12-18 Jack Klys , Jake Snell , Richard Zemel

Variational autoencoders have been widely applied for natural language generation, however, there are two long-standing problems: information under-representation and posterior collapse. The former arises from the fact that only the last…

Machine Learning · Computer Science 2021-06-17 Xianghong Fang , Haoli Bai , Zenglin Xu , Michael Lyu , Irwin King

The generative autoencoders, such as the variational autoencoders or the adversarial autoencoders, have achieved great success in lots of real-world applications, including image generation, and signal communication. However, little concern…

Machine Learning · Computer Science 2023-07-06 Mingfei Lu , Badong Chen

We propose a method for learning dynamical systems from high-dimensional empirical data that combines variational autoencoders and (spatio-)temporal attention within a framework designed to enforce certain scientifically-motivated…

Machine Learning · Computer Science 2023-06-22 Kai Lagemann , Christian Lagemann , Sach Mukherjee

This paper presents an infinite variational autoencoder (VAE) whose capacity adapts to suit the input data. This is achieved using a mixture model where the mixing coefficients are modeled by a Dirichlet process, allowing us to integrate…

Machine Learning · Computer Science 2016-11-28 Ehsan Abbasnejad , Anthony Dick , Anton van den Hengel

Powerful generative models, particularly in Natural Language Modelling, are commonly trained by maximizing a variational lower bound on the data log likelihood. These models often suffer from poor use of their latent variable, with ad-hoc…

Machine Learning · Statistics 2018-06-13 Alex Mansbridge , Roberto Fierimonte , Ilya Feige , David Barber

Turbulent flows are chaotic and multi-scale dynamical systems, which have large numbers of degrees of freedom. Turbulent flows, however, can be modelled with a smaller number of degrees of freedom when using the appropriate coordinate…

Machine Learning · Computer Science 2024-12-11 Yaxin Mo , Tullio Traverso , Luca Magri

Discrete latent spaces in variational autoencoders have been shown to effectively capture the data distribution for many real-world problems such as natural language understanding, human intent prediction, and visual scene representation.…

Machine Learning · Computer Science 2021-01-19 Masha Itkina , Boris Ivanovic , Ransalu Senanayake , Mykel J. Kochenderfer , Marco Pavone

In just three years, Variational Autoencoders (VAEs) have emerged as one of the most popular approaches to unsupervised learning of complicated distributions. VAEs are appealing because they are built on top of standard function…

Machine Learning · Statistics 2021-01-05 Carl Doersch

Recurrent models for sequences have been recently successful at many tasks, especially for language modeling and machine translation. Nevertheless, it remains challenging to extract good representations from these models. For instance, even…

Machine Learning · Computer Science 2018-01-31 Łukasz Kaiser , Samy Bengio

We present a variational autoencoder framework for learning and generating configurations of structured polymer globules from distance matrices. We used coarse-grained molecular dynamics to sample polyethylene structures, which we used as…

In this paper, we study two aspects of the variational autoencoder (VAE): the prior distribution over the latent variables and its corresponding posterior. First, we decompose the learning of VAEs into layerwise density estimation, and…

Machine Learning · Computer Science 2017-10-09 Chin-Wei Huang , Ahmed Touati , Laurent Dinh , Michal Drozdzal , Mohammad Havaei , Laurent Charlin , Aaron Courville

Many real-world datasets contain hidden structure that cannot be detected by simple linear correlations between input features. For example, latent factors may influence the data in a coordinated way, even though their effect is invisible…

Variational autoencoders (VAEs) are popular likelihood-based generative models which can be efficiently trained by maximizing an Evidence Lower Bound (ELBO). There has been much progress in improving the expressiveness of the variational…

Machine Learning · Statistics 2023-08-29 Marcel Hirt , Vasileios Kreouzis , Petros Dellaportas

We consider the problem of learning Variational Autoencoders (VAEs), i.e., a type of deep generative model, from data with missing values. Such data is omnipresent in real-world applications of machine learning because complete data is…

Machine Learning · Computer Science 2023-10-26 Timur Sudak , Sebastian Tschiatschek

Variational Autoencoders (VAEs) are powerful generative models for learning latent representations. Standard VAEs generate dispersed and unstructured latent spaces by utilizing all dimensions, which limits their interpretability, especially…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Farshad Sangari Abiz , Reshad Hosseini , Babak N. Araabi

The integrative analysis of histopathological images and genomic data has received increasing attention for survival prediction of human cancers. However, the existing studies always hold the assumption that full modalities are available.…

Computer Vision and Pattern Recognition · Computer Science 2025-03-19 Junjie Zhou , Jiao Tang , Yingli Zuo , Peng Wan , Daoqiang Zhang , Wei Shao

Latent variable models can be used to probabilistically "fill-in" missing data entries. The variational autoencoder architecture (Kingma and Welling, 2014; Rezende et al., 2014) includes a "recognition" or "encoder" network that infers the…

Machine Learning · Computer Science 2019-02-20 Christopher K. I. Williams , Charlie Nash , Alfredo Nazábal
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