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Related papers: Physical foundations of biological complexity

200 papers

A novel mechanism for the generation of self-organized criticality (SOC) is discussed in terms of the coupled-vibration model where the total system is forced under the uniform expansion of the Hubble type. This system shows a robust SOC…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Akira Iwamoto , Shinpei Chikazumi

Examining individual components of cellular systems has been successful in uncovering molecular reactions and interactions. However, the challenge lies in integrating these components into a comprehensive system-scale map. This difficulty…

Other Quantitative Biology · Quantitative Biology 2024-07-03 Nima Dehghani

Ecosystems are complex and dynamic systems. Over billions of years, they have developed advanced capabilities to provide stable functions, despite changes in their environment. In this paper, we argue that the laws of organization and…

Software Engineering · Computer Science 2012-07-11 Benoit Baudry , Martin Monperrus

Apparent biodiversity on earth exists only if we compare different species separated from their environments. Meanwhile coexisting species have to be identical in terms of energetic interactions. Consider the biosphere as a network of…

Populations and Evolution · Quantitative Biology 2007-05-23 D. Balciunas

Researchers have proposed that the distinction between so-called "simple" and "complex" societies can be expressed by an increase in the number of levels at which functional organization, interaction, and thus selection, operate. In spite…

adap-org · Physics 2007-05-23 Carl Lipo , Mark Madsen

When a large number of similar entities interact among each other and with their environment at a low scale, unexpected outcomes at higher spatio-temporal scales might spontaneously arise. This nontrivial phenomenon, known as emergence,…

Physics and Society · Physics 2022-05-25 Oriol Artime , Manlio De Domenico

Empirical evidence suggesting that living systems might operate in the vicinity of critical points, at the borderline between order and disorder, has proliferated in recent years, with examples ranging from spontaneous brain activity to…

Statistical Mechanics · Physics 2014-07-25 Jorge Hidalgo , Jacopo Grilli , Samir Suweis , Miguel A. Munoz , Jayanth R. Banavar , Amos Maritan

What determines biodiversity in nature is a prominent issue in ecology, especially in biotic resource systems that are typically devoid of cross-feeding. Here, we show that by incorporating pairwise encounters among consumer individuals…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Shijie Zhang , Yiyuan Niu , Xin Wang

The importance of molecular-scale forces in sculpting biological form and function has been acknowledged for more than a century. Accounting for forces in biology is a problem that lies at the intersection of soft condensed matter physics,…

Soft Condensed Matter · Physics 2025-12-10 K. Vijay Kumar , Mandar M. Inamdar , Pramod A. Pullarkat , Gautam I. Menon

All life, including cells and artificial protocells, must integrate diverse molecules into a single unit in order to reproduce. Despite expected pressure to evolve a simple system with the fastest replication speed, the mechanism by which…

Cell Behavior · Quantitative Biology 2014-08-12 Atsushi Kamimura , Kunihiko Kaneko

We argue that the coordination of the activities of individual complex agents enables a system to develop and sustain complexity at a higher level. We exemplify relevant mechanisms through computer simulations of a toy system, a coupled map…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Fatihcan M. Atay , Jürgen Jost

Emergent behavior in complex systems arises from nonlinear interactions among components, yet the intricate nature of self-organization often obscures the underlying causal relationships, long regarded as the "holy grail" of complexity…

Adaptation and Self-Organizing Systems · Physics 2025-10-14 Lina Yan , Jeffrey Huy Khong , Aleksandar Kostadinov , Wen-Jun Chen , Jerry Ying Hsi Fuh , Chih-Ming Ho

The spatial character of territorial systems plays a crucial role in the emergence of their complexities. This contribution aims at illustrating to what extent different types of complexities can be exhibited in models of such systems. We…

Physics and Society · Physics 2019-01-29 Juste Raimbault

An important feature of many complex systems, both natural and artificial, is the structure and organization of their interaction networks with interesting properties. Here we present a theory of self-organization by evolutionary adaptation…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Venkat Venkatasubramanian , Santhoji Katare , Priyan R. Patkar , Fangping Mu

Complexity is an interdisciplinary concept which, first of all, addresses the question of how order emerges out of randomness. For many reasons matrices provide a very practical and powerful tool in approaching and quantifying the related…

Soft Condensed Matter · Physics 2008-12-18 S. Drozdz , J. Kwapien , J. Speth , M. Wojcik

Various self-organized characteristics of the international system can be identified with the help of a complexity science perspective. The perspective discussed in this article is based on various complexity science concepts and theories,…

Adaptation and Self-Organizing Systems · Physics 2014-09-25 Ingo Piepers

Since the time of Darwin, scientists have struggled to reconcile the evolution of biological forms in a universe determined by fixed laws. These laws underpin the origin of life, evolution, human culture and technology, as set by the…

Any real interaction process produces many incompatible system versions, or realisations, giving rise to omnipresent dynamic randomness and universally defined complexity (arXiv:physics/9806002). Since quantum behaviour dynamically emerges…

General Physics · Physics 2014-01-30 Andrei P. Kirilyuk

The present view of biological phenomena is based on a biochemical paradigm that development of living organisms is defined by information stored in a molecular form as some genetic code. However, new discoveries indicate that biological…

Other Quantitative Biology · Quantitative Biology 2023-11-14 Yuri K. Shestopaloff

This paper proposes a variational approach to describe the evolution of organization of complex systems from first principles, as increased efficiency of physical action. Most simply stated, physical action is the product of the energy and…

Adaptation and Self-Organizing Systems · Physics 2014-07-29 Georgi Yordanov Georgiev , Kaitlin Henry , Timothy Bates , Erin Gombos , Alexander Casey , Michael Daly , Amrit Vinod , Hyunseung Lee