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Deep learning has become a powerful tool in computational biology, revolutionising the analysis and interpretation of biological data over time. In our article review, we delve into various aspects of deep learning in computational biology.…

In this paper we propose the Structured Deep Neural Network (structured DNN) as a structured and deep learning framework. This approach can learn to find the best structured object (such as a label sequence) given a structured input (such…

Computation and Language · Computer Science 2015-11-10 Yi-Hsiu Liao , Hung-yi Lee , Lin-shan Lee

Multilayered artificial neural networks are becoming a pervasive tool in a host of application fields. At the heart of this deep learning revolution are familiar concepts from applied and computational mathematics; notably, in calculus,…

History and Overview · Mathematics 2018-01-19 Catherine F. Higham , Desmond J. Higham

Deep learning architectures based on convolutional neural networks tend to rely on continuous, smooth features. While this characteristics provides significant robustness and proves useful in many real-world tasks, it is strikingly…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Zuzanna Buchnajzer , Kacper Dobek , Stanisław Hapke , Daniel Jankowski , Krzysztof Krawiec

Management and efficient operations in critical infrastructure such as Smart Grids take huge advantage of accurate power load forecasting which, due to its nonlinear nature, remains a challenging task. Recently, deep learning has emerged in…

Machine Learning · Computer Science 2019-07-23 Alberto Gasparin , Slobodan Lukovic , Cesare Alippi

Inspired by the success of deploying deep learning in the fields of Computer Vision and Natural Language Processing, this learning paradigm has also found its way into the field of Music Information Retrieval. In order to benefit from deep…

Neural and Evolutionary Computing · Computer Science 2019-02-13 Jaehun Kim , Julián Urbano , Cynthia C. S. Liem , Alan Hanjalic

Almost half a billion people world-wide suffer from disabling hearing loss. While hearing aids can partially compensate for this, a large proportion of users struggle to understand speech in situations with background noise. Here, we…

The aim of the study is to investigate the complex mechanisms of speech perception and ultimately decode the electrical changes in the brain accruing while listening to speech. We attempt to decode heard speech from intracranial…

Human-Computer Interaction · Computer Science 2025-01-28 Milán András Fodor , Tamás Gábor Csapó , Frigyes Viktor Arthur

Deep Language Models (DLMs) provide a novel computational paradigm for understanding the mechanisms of natural language processing in the human brain. Unlike traditional psycholinguistic models, DLMs use layered sequences of continuous…

Signal processing traditionally relies on classical statistical modeling techniques. Such model-based methods utilize mathematical formulations that represent the underlying physics, prior information and additional domain knowledge. Simple…

Signal Processing · Electrical Eng. & Systems 2023-06-08 Nir Shlezinger , Yonina C. Eldar

This paper studies deep neural networks for solving extremely large linear systems arising from highdimensional problems. Because of the curse of dimensionality, it is expensive to store both the solution and right-hand side vector in such…

Numerical Analysis · Mathematics 2023-03-07 Yiqi Gu , Michael K. Ng

Converging evidence suggests that the mammalian ventral visual pathway encodes increasingly complex stimulus features in downstream areas. Using deep convolutional neural networks, we can now quantitatively demonstrate that there is indeed…

Neurons and Cognition · Quantitative Biology 2017-03-13 Umut Güçlü , Marcel A. J. van Gerven

Channel charting builds a map of the radio environment in an unsupervised way. The obtained chart locations can be seen as low-dimensional compressed versions of channel state information that can be used for a wide variety of applications,…

Machine Learning with Deep Neural Networks (DNNs) has become a successful tool in solving tasks across various fields of application. However, the complexity of DNNs makes it difficult to understand how they solve their learned task. To…

Machine Learning · Computer Science 2023-06-16 Valerie Krug , Raihan Kabir Ratul , Christopher Olson , Sebastian Stober

Deep learning, computational neuroscience, and cognitive science have overlapping goals related to understanding intelligence such that perception and behaviour can be simulated in computational systems. In neuroimaging, machine learning…

Neural and Evolutionary Computing · Computer Science 2018-10-23 Jessica A. F. Thompson , Yoshua Bengio , Elia Formisano , Marc Schönwiesner

Disentangling the encodings of neural models is a fundamental aspect for improving interpretability, semantic control and downstream task performance in Natural Language Processing. Currently, most disentanglement methods are unsupervised…

Computation and Language · Computer Science 2023-02-17 Danilo S. Carvalho , Giangiacomo Mercatali , Yingji Zhang , Andre Freitas

Thanks to the availability of large scale digital datasets and massive amounts of computational power, deep learning algorithms can learn representations of data by exploiting multiple levels of abstraction. These machine learning methods…

Disordered Systems and Neural Networks · Physics 2018-10-01 Alberto Testolin , Michele Piccolini , Samir Suweis

In this paper, we investigate a deep learning approach for speech denoising through an efficient ensemble of specialist neural networks. By splitting up the speech denoising task into non-overlapping subproblems and introducing a…

Audio and Speech Processing · Electrical Eng. & Systems 2020-08-11 Aswin Sivaraman , Minje Kim

We present a new distributed representation in deep neural nets wherein the information is represented in native form as a matrix. This differs from current neural architectures that rely on vector representations. We consider matrices as…

Machine Learning · Computer Science 2018-02-06 Kien Do , Truyen Tran , Svetha Venkatesh

Deep neural networks have seen enormous success in various real-world applications. Beyond their predictions as point estimates, increasing attention has been focused on quantifying the uncertainty of their predictions. In this review, we…

Machine Learning · Computer Science 2023-02-06 Chengyu Dong