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Dissipative structures are generally observed when a system relaxes from a far from equilibrium state. To address the reverse question given by the title, we investigate the relaxation process in a closed chemical reaction-diffusion system…

Pattern Formation and Solitons · Physics 2007-05-23 Akinori Awazu , Kunihiko Kaneko

Many patterning events in multi-cellular organisms rely on cell-to-cell contact signaling, such as the Notch pathway in metazoans. A particularly interesting phenomenon in this form of communication is lateral inhibition where a cell that…

Dynamical Systems · Mathematics 2012-01-09 Murat Arcak

Reaction diffusion systems with Turing instability and mass conservation are studied. In such systems, abrupt decays of stripes follow quasi-stationary states in sequence. At steady state, the distance between stripes is much longer than…

Pattern Formation and Solitons · Physics 2009-11-11 Shuji Ishihara , Mikiya Otsuji , Atsushi Mochizuki

The observed architecture of ecological and socio-economic networks differs significantly from that of random networks. From a network science standpoint, non-random structural patterns observed in real networks call for an explanation of…

Physics and Society · Physics 2019-05-30 Manuel Sebastian Mariani , Zhuo-Ming Ren , Jordi Bascompte , Claudio Juan Tessone

Spatial many-species predator-prey systems have been shown to yield very rich space-time patterns. This observation begs the question whether there exist universal mechanisms for generating this type of emerging complex patterns in…

Statistical Mechanics · Physics 2019-06-18 Barton L. Brown , Hildegard Meyer-Ortmanns , Michel Pleimling

Collective behavior of bacterial colonies plays critical roles in adaptability, survivability, biofilm expansion and infection. We employ an individual-based model of an interstitial biofilm to study emergent pattern formation based on the…

Adaptation and Self-Organizing Systems · Physics 2017-02-01 Cameron Zachreson , Christian Wolff , Cynthia B. Whitchurch , Milos Toth

Biological networks have evolved to be highly functional within uncertain environments while remaining extremely adaptable. One of the main contributors to the robustness and evolvability of biological networks is believed to be their…

Molecular Networks · Quantitative Biology 2008-02-14 Arend Hintze , Christoph Adami

In this paper, the Turing instability in reaction-diffusion models defined on complex networks is studied. Here, we focus on three types of models which generate complex networks, i.e. the Erd\H{o}s-R\'enyi, the Watts-Strogatz, and the…

Pattern Formation and Solitons · Physics 2016-04-22 Yusuke Ide , Hirofumi Izuhara , Takuya Machida

Mathematical models of stem cell differentiation are commonly based upon the concept of subsequent cell fate decisions, each controlled by a gene regulatory network. These networks exhibit a multistable behavior and cause the system to…

Quantitative Methods · Quantitative Biology 2011-07-06 Christian Breindl , Daniella Schittler , Steffen Waldherr , Frank Allgöwer

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

Biological Physics · Physics 2015-05-13 Sitabhra Sinha

Advances in neural recording methods enable sampling from populations of thousands of neurons during the performance of behavioral tasks, raising the question of how recorded activity relates to the theoretical models of computations…

Neurons and Cognition · Quantitative Biology 2020-07-01 Audrey J. Sederberg , Ilya Nemenman

Rhythmic activities that alternate between coherent and incoherent phases are ubiquitous in chemical, ecological, climate, or neural systems. Despite their importance, general mechanisms for their emergence are little understood. In order…

Adaptation and Self-Organizing Systems · Physics 2022-06-01 Max Thiele , Rico Berner , Peter A. Tass , Eckehard Schöll , Serhiy Yanchuk

The concept of cross diffusion is applied to some biological systems. The conditions for persistence and Turing instability in the presence of cross diffusion are derived. Many examples including: predator-prey, epidemics (with and without…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 E. Ahmed , A. S. Hegazi , A. S. Elgazzar

The possibility that evolutionary forces -- together with a few fundamental factors such as thermodynamic constraints, specific computational features enabling information processing, and ecological processes -- might constrain the logic of…

Biological Physics · Physics 2025-12-30 Manlio De Domenico

A dynamic model for cell differentiation is studied, where cells with internal chemical reaction dynamics interact with each other and replicate. It leads to spontaneous differentiation of cells and determination, as is discussed in the…

adap-org · Physics 2007-05-23 Chikara Furusawa , Kunihiko Kaneko

Deterministic many-body systems governed by simple interactions can self-organize into macroscopic patterns, and the determinants of long-time behavior are assumed to be encoded in the initial configuration. Here we show that predictability…

Biological Physics · Physics 2026-04-02 Lars Koopmans , Elinor M. Kay , Hyun Youk

The emergence of macroscopic order and patterns is a central paradigm in systems of (self-)propelled agents, and a key component in the structuring of many biological systems.The relationships between the ordering process and the underlying…

Soft Condensed Matter · Physics 2020-12-02 Jonas Denk , Erwin Frey

Pattern formation is a visual understanding of the dynamics of complex systems. Patterns arise in many ways, such as the segmentation of animals, bacterial colonies during growth, vegetation, chemical reactions, etc. In most cases, the…

Dynamical Systems · Mathematics 2022-08-09 Swadesh Pal , Roderick Melnik , Malay Banerjee

It is well-known that in two dimensions Turing systems produce spots, stripes and labyrinthine patterns, and in three dimensions lamellar and spherical structures or their combinations are observed. We study transitions between these states…

Statistical Mechanics · Physics 2007-05-23 Teemu Leppanen , Mikko Karttunen , R. A. Barrio , Kimmo Kaski

The synchronization of coupled oscillators is a fascinating manifestation of self-organization that nature employs to orchestrate essential processes of life, such as the beating of the heart. Although it was long thought that synchrony or…

Adaptation and Self-Organizing Systems · Physics 2013-07-29 Erik Andreas Martens , Shashi Thutupalli , Antoine Fourrière , Oskar Hallatschek
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