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Build-time configuration and environment assumptions are hampering progress and usability in scientific software. That which would be utterly unacceptable in non-scientific software somehow passes for the norm in scientific packages. The…

Software Engineering · Computer Science 2014-07-11 Jed Brown , Matthew G. Knepley , Barry F. Smith

Computational scientists are facing a new era where the old ways of developing and reusing code have to be left behind and a few daring steps are to be made towards new horizons. The present work analyzes the needs that drive this change,…

Computational Engineering, Finance, and Science · Computer Science 2021-08-23 Zsolt I. Lázár , Jouke R. Heringa , Bazil Pârv , Simon W. de Leeuw

Recently, much attention has been focused on the replicability of scientific results, causing scientists, statisticians, and journal editors to examine closely their methodologies and publishing criteria. Experimental particle physicists…

Data Analysis, Statistics and Probability · Physics 2021-05-07 Thomas R. Junk , Louis Lyons

Those seeking to reproduce a computational experiment often need to manually look at the code to see how to build necessary libraries, configure parameters, find data, and invoke the experiment; it is not automatic. Automatic…

Software Engineering · Computer Science 2023-07-24 Samuel Grayson , Reed Milewicz , Joshua Teves , Daniel S. Katz , Darko Marinov

Background. Reproducibility is essential to the scientific method, but reproduction is often a laborious task. Recent works have attempted to automate this process and relieve researchers of this workload. However, due to varying…

Computers and Society · Computer Science 2026-01-09 Thijs Snelleman , Peter Lundestad Lawrence , Holger H. Hoos , Odd Erik Gundersen

Scientific advancement relies on the ability to share and reproduce results. When data analysis or calculations are carried out using software written by scientists there are special challenges around code versions, quality and code…

Software Engineering · Computer Science 2025-07-09 S. Lee , C. Myers , A. Yang , T. Zhang , S. J. L. Billinge

Within an increasing number of domains an important emerging need is the ability for technically naive users to compose computational elements into novel configurations. Examples include astronomers who create new analysis pipelines to…

Software Engineering · Computer Science 2012-10-19 David Garlan , Vishal Dwivedi , Ivan Ruchkin , Bradley Schmerl

Data analysis in fundamental sciences nowadays is an essential process that pushes frontiers of our knowledge and leads to new discoveries. At the same time we can see that complexity of those analyses increases fast due to a)~enormous…

Data Analysis, Statistics and Probability · Physics 2016-01-20 Tatiana Likhomanenko , Alex Rogozhnikov , Alexander Baranov , Egor Khairullin , Andrey Ustyuzhanin

Challenges to reproducibility and replicability have gained widespread attention, driven by large replication projects with lukewarm success rates. A nascent work has emerged developing algorithms to estimate the replicability of published…

Digital Libraries · Computer Science 2024-05-06 Chuhao Wu , Tatiana Chakravorti , John Carroll , Sarah Rajtmajer

Machine learning is facing a 'reproducibility crisis' where a significant number of works report failures when attempting to reproduce previously published results. We evaluate the sources of reproducibility failures using a meta-analysis…

Machine Learning · Computer Science 2023-05-23 Iordanis Fostiropoulos , Bowman Brown , Laurent Itti

Automatic generation of graphic designs has recently received considerable attention. However, the state-of-the-art approaches are complex and rely on proprietary datasets, which creates reproducibility barriers. In this paper, we propose…

Computer Vision and Pattern Recognition · Computer Science 2024-06-13 Naoto Inoue , Kento Masui , Wataru Shimoda , Kota Yamaguchi

Reservoir computing is a versatile paradigm in computational neuroscience and machine learning, that exploits the non-linear dynamics of a dynamical system - the reservoir - to efficiently process time-dependent information. Since its…

Quantum Physics · Physics 2024-05-21 Francesco Monzani , Enrico Prati

A reproducibility crisis has been reported in science, but the extent to which it affects AI research is not yet fully understood. Therefore, we performed a systematic replication study including 30 highly cited AI studies relying on…

Artificial Intelligence · Computer Science 2024-12-25 Odd Erik Gundersen , Odd Cappelen , Martin Mølnå , Nicklas Grimstad Nilsen

Data centres that use consumer-grade disks drives and distributed peer-to-peer systems are unreliable environments to archive data without enough redundancy. Most redundancy schemes are not completely effective for providing high…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-09 Vero Estrada-Galiñanes , Ethan Miller , Pascal Felber , Jehan-François Pâris

Reproducible builds are a set of software development practices that establish an independently verifiable path from source code to binary artifacts, helping to detect and mitigate certain classes of supply chain attacks. Although quantum…

Quantum Physics · Physics 2025-10-03 Iyán Méndez Veiga , Esther Hänggi

This paper investigates the conceptual relationship between openness and reproducibility using a model-centric approach, heavily informed by probability theory and statistics. We first clarify the concepts of reliability, auditability,…

Other Statistics · Statistics 2019-10-30 Bert Baumgaertner , Berna Devezer , Erkan O. Buzbas , Luis G. Nardin

The accelerating pace of research on autoregressive generative models has produced thousands of papers, making manual literature surveys and reproduction studies increasingly impractical. We present a fully open-source, reproducible…

Information Retrieval · Computer Science 2025-08-07 Faruk Alpay , Bugra Kilictas , Hamdi Alakkad

Reproducibility has been consistently identified as an important component of scientific research. Although there is a general consensus on the importance of reproducibility along with the other commonly used 'R' terminology (i.e.,…

Information Theory · Computer Science 2020-12-29 Anirudh Prabhu , Peter Fox

We make the case for the systematic, reliable preservation of event-wise data, derived data products, and executable analysis code. This preservation enables the analyses' long-term future reuse, in order to maximise the scientific impact…

In most constraint programming systems, a limited number of search engines is offered while the programming of user-customized search algorithms requires low-level efforts, which complicates the deployment of such algorithms. To alleviate…

Programming Languages · Computer Science 2016-02-05 Yong Lin , Martin Henz