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An adaptive refinement strategy, based on an equilibrated flux a posteriori error estimator, is proposed in the context of defeaturing problems. Defeaturing consists of removing features from complex domains to simplify mesh generation and…

Numerical Analysis · Mathematics 2026-03-04 Annalisa Buffa , Denise Grappein , Rafael Vázquez

We describe a powerful methodology for numerical solution of 3-D self-gravitational hydrodynamics problems with extremely high resolution. Our method utilizes the technique of local adaptive mesh refinement (AMR), employing multiple grids…

Astrophysics · Physics 2016-01-27 Richard I. Klein , Robert T. Fisher , Christopher F. McKee , J. Kelly Truelove

We present a scalable, parallel implementation of a solver for the solution of a phase-field model for quasi-static brittle fracture. The code is available as open source. Numerical solutions in 2d and 3d with adaptive mesh refinement show…

Numerical Analysis · Mathematics 2018-06-27 Timo Heister , Thomas Wick

This paper presents a seamless algorithm for the application of the multilevel Monte Carlo (MLMC) method to the ensemble transform particle filter (ETPF). The algorithm uses a combination of optimal coupling transformations between coarse…

Numerical Analysis · Mathematics 2017-06-15 Alastair Gregory , Colin Cotter

A merge tree is a topological descriptor of a real-valued function. Merge trees are used in visualization and topological data analysis, either directly or as a means to another end: computing a 0-dimensional persistence diagram,…

Computational Geometry · Computer Science 2023-01-31 Arnur Nigmetov , Dmitriy Morozov

Multi-slice magnetic resonance images of the fetal brain are usually contaminated by severe and arbitrary fetal and maternal motion. Hence, stable and robust motion correction is necessary to reconstruct high-resolution 3D fetal brain…

Image and Video Processing · Electrical Eng. & Systems 2022-09-23 Wen Shi , Haoan Xu , Cong Sun , Jiwei Sun , Yamin Li , Xinyi Xu , Tianshu Zheng , Yi Zhang , Guangbin Wang , Dan Wu

The focus of this work is on the development of an error-driven isogeometric framework, capable of automatically performing an adaptive simulation in the context of second- and fourth-order, elliptic partial differential equations defined…

Numerical Analysis · Mathematics 2020-04-22 Luca Coradello , Pablo Antolin , Rafael Vázquez , Annalisa Buffa

String kernels are attractive data analysis tools for analyzing string data. Among them, alignment kernels are known for their high prediction accuracies in string classifications when tested in combination with SVM in various applications.…

Machine Learning · Computer Science 2019-11-15 Yasuo Tabei , Yoshihiro Yamanishi , Rasmus Pagh

In this paper, we present a topology optimization (TO) framework to simultaneously optimize the matrix topology and fiber distribution of functionally graded continuous fiber-reinforced composites (FRC). Current approaches in density-based…

Computational Engineering, Finance, and Science · Computer Science 2022-05-16 Aaditya Chandrasekhar , Amir Mirzendehdel , Morad Behandish , Krishnan Suresh

In recent years, non-parametric methods utilizing random walks on graphs have been used to solve a wide range of machine learning problems, but in their simplest form they do not scale well due to the quadratic complexity. In this paper, a…

Machine Learning · Computer Science 2012-10-19 Saeed Amizadeh , Bo Thiesson , Milos Hauskrecht

Simultaneous functional PET/MR (sf-PET/MR) presents a cutting-edge multimodal neuroimaging technique. It provides an unprecedented opportunity for concurrently monitoring and integrating multifaceted brain networks built by spatiotemporally…

Image and Video Processing · Electrical Eng. & Systems 2024-09-23 Luoyu Wang , Yitian Tao , Qing Yang , Yan Liang , Siwei Liu , Hongcheng Shi , Dinggang Shen , Han Zhang

While Structure from Motion (SfM) achieves great success in 3D reconstruction, it still meets challenges on large scale scenes. In this work, large scale SfM is deemed as a graph problem, and we tackle it in a divide-and-conquer manner.…

Computer Vision and Pattern Recognition · Computer Science 2020-06-09 Yu Chen , Shuhan Shen , Yisong Chen , Guoping Wang

Recent efforts to scale Transformer models have demonstrated rapid progress across a wide range of tasks (Wei et al., 2022). However, fine-tuning these models for downstream tasks is expensive due to their large parameter counts.…

The recently proposed learned indexes have attracted much attention as they can adapt to the actual data and query distributions to attain better search efficiency. Based on this technique, several existing works build up indexes for…

Databases · Computer Science 2023-09-12 Jian Gao , Xin Cao , Xin Yao , Gong Zhang , Wei Wang

Segment Anything Model (SAM) fine-tuning has shown remarkable performance in medical image segmentation in a fully supervised manner, but requires precise annotations. To reduce the annotation cost and maintain satisfactory performance, in…

Computer Vision and Pattern Recognition · Computer Science 2025-01-22 Shumeng Li , Lei Qi , Qian Yu , Jing Huo , Yinghuan Shi , Yang Gao

General Matrix Multiplication (GEMM) is a critical operation underpinning a wide range of applications in high-performance computing (HPC) and artificial intelligence (AI). The emergence of hardware optimized for low-precision arithmetic…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-08-21 Qiao Zhang , Rabab Alomairy , Dali Wang , Zhuowei Gu , Qinglei Cao

We present results of 3D numerical simulations using a finite difference code featuring fixed mesh refinement (FMR), in which a subset of the computational domain is refined in space and time. We apply this code to a series of test cases…

General Relativity and Quantum Cosmology · Physics 2010-04-06 Erik Schnetter , Scott H. Hawley , Ian Hawke

We consider the reliable implementation of an adaptive high-order unfitted finite element method on Cartesian meshes for solving elliptic interface problems with geometrically curved singularities. We extend our previous work on the…

Numerical Analysis · Mathematics 2024-03-07 Zhiming Chen , Yong Liu

We analyze adaptive mesh-refining algorithms for conforming finite element discretizations of certain non-linear second-order partial differential equations. We allow continuous polynomials of arbitrary, but fixed polynomial order. The…

Numerical Analysis · Mathematics 2014-03-14 Michael Feischl , Thomas Führer , Dirk Praetorius

In this paper we introduce a block-structured adaptive mesh refinement (AMR) software framework that incorporates tiling, a well-known loop transformation. Because the multiscale, multiphysics codes built in BoxLib are designed to solve…

Mathematical Software · Computer Science 2016-04-14 Weiqun Zhang , Ann Almgren , Marcus Day , Tan Nguyen , John Shalf , Didem Unat