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We provide a short introduction to the field of topological data analysis and discuss its possible relevance for the study of complex systems. Topological data analysis provides a set of tools to characterise the shape of data, in terms of…

Data Analysis, Statistics and Probability · Physics 2018-12-05 Vsevolod Salnikov , Daniele Cassese , Renaud Lambiotte

Topological techniques have become a popular tool for studying information flows in neural networks. In particular, simplicial homology theory is used to analyze how cognitive representations of space emerge from large conglomerates of…

Neurons and Cognition · Quantitative Biology 2025-02-19 Andrey Babichev , Vladimir Vashin , Yuri Dabaghian

Bibliometric studies based on the Web of Science (WOS) database have become an increasingly popular method for analysing the structure of scientific research. So do network approaches, which, based on empirical data, make it possible to…

Digital Libraries · Computer Science 2023-08-03 Tanya Araújo , Alexandre Abreu , Francisco Louçã

Researchers usually come up with new ideas only after thoroughly comprehending vast quantities of literature. The difficulty of this procedure is exacerbated by the fact that the number of academic publications is growing exponentially. In…

Computation and Language · Computer Science 2023-06-06 Yi Xu , Shuqian Sheng , Bo Xue , Luoyi Fu , Xinbing Wang , Chenghu Zhou

The application of network techniques to the analysis of neural data has greatly improved our ability to quantify and describe these rich interacting systems. Among many important contributions, networks have proven useful in identifying…

Quantitative Methods · Quantitative Biology 2018-06-14 Ann E. Sizemore , Jennifer Phillips-Cremins , Robert Ghrist , Danielle S. Bassett

Higher-order networks are widely used to describe complex systems in which interactions can involve more than two entities at once. In this paper, we focus on inclusion within higher-order networks, referring to situations where specific…

Physics and Society · Physics 2025-07-22 Nicholas W. Landry , Jean-Gabriel Young , Nicole Eikmeier

Simplicial complexes capture the underlying network topology and geometry of complex systems ranging from the brain to social networks. Here we show that algebraic topology is a fundamental tool to capture the higher-order dynamics of…

Disordered Systems and Neural Networks · Physics 2021-07-12 Reza Ghorbanchian , Juan G. Restrepo , Joaquín J. Torres , Ginestra Bianconi

Knowledge production is often viewed as an endogenous process in which discovery arises through the recombination of existing theories, findings, and concepts. Yet given the vast space of potential recombinations, not all are equally…

Computers and Society · Computer Science 2025-09-29 Kara Kedrick , Wenlong Yang , Thomas Gebhart , Yang Wang , Russell J. Funk

We present a new approach to simple homotopy theory of polyhedra using finite topological spaces. We define the concept of collapse of a finite space and prove that this new notion corresponds exactly to the concept of a simplicial…

Algebraic Topology · Mathematics 2007-05-23 Jonathan Ariel Barmak , Elias Gabriel Minian

The principle of similarity, or homophily, is often used to explain patterns observed in complex networks such as transitivity and the abundance of triangles (3-cycles). However, many phenomena from division of labor to protein-protein…

Physics and Society · Physics 2022-10-12 Szymon Talaga , Andrzej Nowak

Hypergraphs and simplical complexes both capture the higher-order interactions of complex systems, ranging from higher-order collaboration networks to brain networks. One open problem in the field is what should drive the choice of the…

Physics and Society · Physics 2022-09-28 Federica Baccini , Filippo Geraci , Ginestra Bianconi

Knowledge is a network of interconnected concepts. Yet, precisely how the topological structure of knowledge constrains its acquisition remains unknown, hampering the development of learning enhancement strategies. Here we study the…

Computation and Language · Computer Science 2021-03-17 Nicolas H. Christianson , Ann Sizemore Blevins , Danielle S. Bassett

The increasing interest in complex networks research has been a consequence of several intrinsic features of this area, such as the generality of the approach to represent and model virtually any discrete system, and the incorporation of…

Network Science provides a universal formalism for modelling and studying complex systems based on pairwise interactions between agents. However, many real networks in the social, biological or computer sciences involve interactions among…

Social and Information Networks · Computer Science 2020-06-24 Daniel Hernández Serrano , Juan Hernández Serrano , Darío Sánchez Gómez

We introduce the Insertion Chain Complex, a higher-dimensional extension of insertion graphs, as a new framework for analyzing finite sets of words. We study its topological and combinatorial properties, in particular its homology groups,…

Combinatorics · Mathematics 2025-09-17 Nataša Jonoska , Francisco Martinez-Figueroa , Masahico Saito

Interactions in complex systems are widely observed across various fields, drawing increased attention from researchers. In mathematics, efforts are made to develop various theories and methods for studying the interactions between spaces.…

Algebraic Topology · Mathematics 2023-11-29 Jian Liu , Dong Chen , Guo-Wei Wei

Persistent homology is a fundamental tool in topological data analysis; however, it lacks methods to quantify the fragility or fineness of cycles, anticipate their formation or disappearance, or evaluate their stability beyond persistence.…

Algebraic Topology · Mathematics 2025-05-16 Pablo Hernández-García , Daniel Hernández Serrano , Darío Sánchez Gómez

We propose an explanatory and computational theory of transformative discoveries in science. The theory is derived from a recurring theme found in a diverse range of scientific change, scientific discovery, and knowledge diffusion theories…

General Literature · Computer Science 2010-02-09 Chaomei Chen , Yue Chen , Mark Horowitz , Haiyan Hou , Zeyuan Liu , Don Pellegrino

The statistical mechanical approach to complex networks is the dominant paradigm in describing natural and societal complex systems. The study of network properties, and their implications on dynamical processes, mostly focus on locally…

Statistical Mechanics · Physics 2013-06-27 Giovanni Petri , Martina Scolamiero , Irene Donato , Francesco Vaccarino

Our work is concerned with simplicial complexes that describe higher-order interactions in real complex systems. This description allows to go beyond the pairwise node-to-node representation that simple networks provide and to capture a…

Statistical Mechanics · Physics 2025-11-13 Sara Najem , Dima Mrad , Mohammad Elsayed
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