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Motile cilia are slender, hair-like cellular appendages that spontaneously oscillate under the action of internal molecular motors and are typically found in dense arrays. These active filaments coordinate their beating to generate…

Soft Condensed Matter · Physics 2022-01-28 Brato Chakrabarti , Sebastian Fürthauer , Michael J. Shelley

Ion transport in biological tissues is crucial in the study of many biological and pathological problems. Some multi-cellular structures, like smooth muscles on the vessel walls, could be treated as periodic bi-domain structures, which…

Analysis of PDEs · Mathematics 2021-03-11 Chun Xiao , Xingye Yue , Huaxiong Huang , Shixin Xu

Biopolymer Networks play an important role in coordinating and regulating collective cellular dynamics via a number of signaling pathways. Here, we investigate the mechanical response of a model biopolymer network due to the active…

Soft Condensed Matter · Physics 2016-11-23 Long Liang , Christopher Jones , Bo Sun , Yang Jiao

We develop a technique for the multivariate data analysis of perturbed self-sustained oscillators. The approach is based on the reconstruction of the phase dynamics model from observations and on a subsequent exploration of this model. For…

Medical Physics · Physics 2019-06-03 M. Rosenblum , M. Frühwirth , M. Moser , A. Pikovsky

Synchronization is central to many complex systems in engineering physics (e.g., the power-grid, Josephson junction circuits, and electro-chemical oscillators) and biology (e.g., neuronal, circadian, and cardiac rhythms). Despite these…

Adaptation and Self-Organizing Systems · Physics 2017-01-13 Dane Taylor , Per Sebastian Skardal , Jie Sun

Cardiac patterns are being used to obtain hard-to-forge biometric signatures and have led to high accuracy in state-of-the-art (SoA) identification applications. However, this performance is obtained under controlled scenarios where cardiac…

Cryptography and Security · Computer Science 2022-03-31 Weizheng Wang , Marco Zuniga , Qing Wang

Trajectories of endosomes inside living eukaryotic cells are highly heterogeneous in space and time and diffuse anomalously due to a combination of viscoelasticity, caging, aggregation and active transport. Some of the trajectories display…

Subcellular Processes · Quantitative Biology 2021-07-28 Nickolay Korabel , Daniel Han , Alessandro Taloni , Gianni Pagnini , Sergei Fedotov , Viki Allan , Thomas A. Waigh

We propose a quite general model of active media by consideration of the interaction between pacemakers via their phase response curves. This model describes a network of pulse oscillators coupled by their response to the internal…

Chaotic Dynamics · Physics 2007-05-23 Sergei Rybalko , Ekaterina Zhuchkova

Self-consistent chaotic transport is studied in a Hamiltonian mean-field model. The model provides a simplified description of transport in marginally stable systems including vorticity mixing in strong shear flows and electron dynamics in…

Dynamical Systems · Mathematics 2016-01-11 D. Martínez-del-Río , D. del-Castillo-Negrete , A. Olvera , R. Calleja

Recent studies have developed tunable topological elastic metamaterials to maximize performance in the presence of varying external conditions, adapt to changing operating requirements, and enable new functionalities such as a programmable…

Applied Physics · Physics 2021-01-19 Patrick Dorin , Kon-Well Wang

We study numerically the dynamics of conduction blocks using a detailed electrophysiological model. We find that this dynamics depends critically on the size of the paced region. Small pacing regions lead to stationary conduction blocks…

Tissues and Organs · Quantitative Biology 2009-11-11 Herve Henry , Wouter-Jan Rappel

We study a system of non-identical bistable particles that is driven by a dynamical constraint and coupled through a non-local mean-field. Assuming piecewise affine constitutive laws we prove the existence of traveling wave solutions and…

Analysis of PDEs · Mathematics 2023-03-14 Michael Herrmann , Barbara Niethammer

Animal morphogenesis often involves significant shape changes of epithelial tissue sheets. Great progress has been made in understanding the underlying cellular driving forces and their coordination through biomechanical feedback loops.…

Soft Condensed Matter · Physics 2024-09-23 Nikolas H. Claussen , Fridtjof Brauns

We introduce a segmentation algorithm to probe temporal organization of heterogeneities in human heartbeat interval time series. We find that the lengths of segments with different local values of heart rates follow a power-law…

Pedestrian dynamics models the walking movement of individuals in a crowd. It has recently been used in the analysis of procedures to reduce the risk of disease spread in airplanes, relying on the SPED model. This is a social force model…

Physics and Society · Physics 2020-07-01 Mehran Sadeghi Lahijani , Tasvirul Islam , Ashok Srinivasan , Sirish Namilae

The proposed system consists of a two-stage cascade. The first stage performs a rough heartbeat detection while the second stage refines the previous one, improving the temporal localization and also classifying the heartbeats into types S1…

Audio and Speech Processing · Electrical Eng. & Systems 2024-11-06 J. Torre-Cruz , D. Martinez-Munoz , N. Ruiz-Reyes , A. J. Munoz-Montoro , M. Puentes-Chiachio , F. J. Canadas-Quesada

Biological systems represent time from microseconds to years. An important gap in our knowledge concerns the mechanisms for encoding time intervals of hundreds of milliseconds to minutes that matter for tasks like navigation, communication,…

Neurons and Cognition · Quantitative Biology 2025-05-22 Raphaël Lafond-Mercier , Leonard Maler , Avner Wallach , André Longtin

This study presents a nonlinear signal processing method for accurate radar-based heartbeat interval estimation by exploiting the periodicity of higher-order harmonics inherent in heartbeat signals. Unlike conventional approaches that…

Signal Processing · Electrical Eng. & Systems 2025-07-29 Kohei Shimomura , Chi-Hsuan Lee , Takuya Sakamoto

In this study we present a novel computational model for unprecedented simulations of the whole cardiac electrophysiology. According to the heterogeneous electrophysiologic properties of the heart, the whole cardiac geometry is decomposed…

Medical Physics · Physics 2022-03-14 Giulio Del Corso , Roberto Verzicco , Francesco Viola

Ventricular tachycardia (VT) and ventricular fibrillation (VF) are lethal rhythm disorders, which are associated with the occurrence of abnormal electrical scroll waves in the heart. Given the technical limitations of imaging and probing,…

Medical Physics · Physics 2020-11-11 K. V. Rajany , Rupamanjari Majumder , Alok Ranjan Nayak , Rahul Pandit
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