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We study the classic problem of subgraph counting, where we wish to determine the number of occurrences of a fixed pattern graph $H$ in an input graph $G$ of $n$ vertices. Our focus is on bounded degeneracy inputs, a rich family of graph…

Data Structures and Algorithms · Computer Science 2025-03-05 Daniel Paul-Pena , C. Seshadhri

Let H be a graph, and let C_H(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating C_H(G). Previous results cover only a few specific instances of this general…

Data Structures and Algorithms · Computer Science 2019-02-20 Martin Furer , Shiva Prasad Kasiviswanathan

The problem of enumerating connected subgraphs of a given size in a graph has been extensively studied in recent years. In this paper, we propose an algorithm with a delay of $O(k\Delta)$ for enumerating all connected induced subgraphs of…

Data Structures and Algorithms · Computer Science 2025-07-09 Chenglong Xiao , Chengyong Mao , Shanshan Wang

Partitioning a graph into blocks of "roughly equal" weight while cutting only few edges is a fundamental problem in computer science with a wide range of applications. In particular, the problem is a building block in applications that…

Data Structures and Algorithms · Computer Science 2021-05-06 Lars Gottesbüren , Tobias Heuer , Peter Sanders , Christian Schulz , Daniel Seemaier

We address the problem of enumerating all maximal clique-partitions of an undirected graph and present an algorithm based on the observation that every maximal clique-partition can be produced from the maximal clique-cover of the graph by…

Discrete Mathematics · Computer Science 2023-09-26 Mircea Marin , Temur Kutsia , Cleo Pau , Mikheil Rukhaia

Finding all maximal $k$-plexes on networks is a fundamental research problem in graph analysis due to many important applications, such as community detection, biological graph analysis, and so on. A $k$-plex is a subgraph in which every…

Data Structures and Algorithms · Computer Science 2022-05-03 Qiangqiang Dai , Rong-Hua Li , Hongchao Qin , Meihao Liao , Guoren Wang

Mining maximal subgraphs with cohesive structures from a bipartite graph has been widely studied. One important cohesive structure on bipartite graphs is k-biplex, where each vertex on one side disconnects at most k vertices on the other…

Databases · Computer Science 2021-12-30 Kaiqiang Yu , Cheng Long , Shengxin Liu , Da Yan

Many common graph data mining tasks take the form of identifying dense subgraphs (e.g. clustering, clique-finding, etc). In biological applications, the natural model for these dense substructures is often a complete bipartite graph…

Data Structures and Algorithms · Computer Science 2019-01-28 Kyle Kloster , Blair D. Sullivan , Andrew van der Poel

To understand the structure of a network, it can be useful to break it down into its constituent pieces. This is the approach taken in a multitude of successful network analysis methods, such as motif analysis. These methods require one to…

Physics and Society · Physics 2023-08-02 Tarmo Nurmi , Mikko Kivelä

Given a graph $G = (V, E)$ and an integer $k$, the Minimum Membership Dominating Set problem asks to compute a set $S \subseteq V$ such that for each $v \in V$, $1 \leq |N[v] \cap S| \leq k$. The problem is known to be NP-complete even on…

Data Structures and Algorithms · Computer Science 2024-08-05 Sangam Balchandar Reddy , Anjeneya Swami Kare

We consider the problem of finding a subgraph of a given graph which minimizes the sum of given functions at vertices evaluated at their subgraph degrees. While the problem is NP-hard already when all functions are the same, we show that it…

Combinatorics · Mathematics 2023-05-30 Shmuel Onn

Graphlets of order $k$ in a graph $G$ are connected subgraphs induced by $k$ nodes (called $k$-graphlets) or by $k$ edges (called edge $k$-graphlets). They are among the interesting subgraphs in network analysis to get insights on both the…

Data Structures and Algorithms · Computer Science 2025-05-15 Alessio Conte , Roberto Grossi , Yasuaki Kobayashi , Kazuhiro Kurita , Davide Rucci , Takeaki Uno , Kunihiro Wasa

There has recently been much progress on exact algorithms for the (un)weighted graph (bi)partitioning problem using branch-and-bound and related methods. In this note we present and improve an easily computable, purely combinatorial lower…

Data Structures and Algorithms · Computer Science 2014-10-03 Jesper Larsson Träff , Martin Wimmer

Graph partitioning is a key fundamental problem in the area of big graph computation. Previous works do not consider the practical requirements when optimizing the big data analysis in real applications. In this paper, motivated by…

Databases · Computer Science 2024-04-10 Baoling Ning , Jianzhong Li

The ability to handle large scale graph data is crucial to an increasing number of applications. Much work has been dedicated to supporting basic graph operations such as subgraph matching, reachability, regular expression matching, etc. In…

Databases · Computer Science 2012-05-31 Zhao Sun , Hongzhi Wang , Haixun Wang , Bin Shao , Jianzhong Li

In a finite undirected simple graph, a {\it chordless cycle} is an induced subgraph which is a cycle. We propose two algorithms to enumerate all chordless cycles of such a graph. Compared to other similar algorithms, the proposed algorithms…

Data Structures and Algorithms · Computer Science 2014-12-01 Elisângela Silva Dias , Diane Castonguay , Humberto Longo , Walid Abdala Rfaei Jradi

Subgraph enumeration is a fundamental problem in graph analytics, which aims to find all instances of a given query graph on a large data graph. In this paper, we propose a system called HUGE to efficiently process subgraph enumeration at…

Databases · Computer Science 2021-03-30 Zhengyi Yang , Longbin Lai , Xuemin Lin , Kongzhang Hao , Wenjie Zhang

Enumerating maximal $k$-biplexes (MBPs) of a bipartite graph has been used for applications such as fraud detection. Nevertheless, there usually exists an exponential number of MBPs, which brings up two issues when enumerating MBPs, namely…

Databases · Computer Science 2022-08-30 Kaiqiang Yu , Cheng Long

We consider the task of detecting a hidden bipartite subgraph in a given random graph. This is formulated as a hypothesis testing problem, under the null hypothesis, the graph is a realization of an Erd\H{o}s-R\'{e}nyi random graph over $n$…

Data Structures and Algorithms · Computer Science 2024-03-07 Asaf Rotenberg , Wasim Huleihel , Ofer Shayevitz

We enumerate factorisations of the complete bipartite graph into spanning semiregular graphs in several cases, including when the degrees of all the factors except one or two are small. The resulting asymptotic behaviour is seen to…

Combinatorics · Mathematics 2022-12-21 Mahdieh Hasheminezhad , Brendan D. McKay