English
Related papers

Related papers: Local negative circuits and cyclic attractors in B…

200 papers

A dynamical system is controllable if by imposing appropriate external signals on a subset of its nodes, it can be driven from any initial state to any desired state in finite time. Here we study the impact of various network…

Physics and Society · Physics 2013-01-16 Márton Pósfai , Yang-Yu Liu , Jean-Jacques Slotine , Albert-László Barabási

Deterministic and stochastic Boolean network models are build for the dynamics of negative feedback loops of the p53 pathways. It is shown that the main function of the negative feedback in the p53 pathways is to keep p53 at a low steady…

Molecular Networks · Quantitative Biology 2009-04-16 Hao Ge , Min Qian

We study Boolean networks which are simple spatial models of the highly conserved Delta-Notch system. The models assume the inhibition of Delta in each cell by Notch in the same cell, and the activation of Notch in presence of Delta in…

Discrete Mathematics · Computer Science 2020-07-31 Elisa Tonello , Heike Siebert

This letter concerns the reliability of coupled oscillator networks in response to fluctuating inputs. Reliability means that (following a transient) an input elicits identical responses upon repeated presentations, regardless of the…

Chaotic Dynamics · Physics 2007-05-23 Kevin K. Lin , Eric Shea-Brown , Lai-Sang Young

We study the versatile performance of networks of coupled circuits. Each of these circuits is composed of a positive and a negative feedback loop in a motif that is frequently found in genetic and neural networks. When two of these circuits…

Adaptation and Self-Organizing Systems · Physics 2015-06-22 Darka Labavić , Hildegard Meyer-Ortmanns

This paper presents new results and reinterpretation of existing conditions for strong structural controllability in a structured network determined by the zero/non-zero patterns of edges. For diffusively-coupled networks with self-loops,…

General Topology · Mathematics 2025-09-08 Nam-Jin Park , Seong-Ho Kwon , Yoo-Bin Bae , Byeong-Yeon Kim , Kevin L. Moore , Hyo-Sung Ahn

Asymptotic random dynamics of weak solutions for a damped stochastic wave equation with the nonlinearity of arbitrarily large exponent and the additive noise on $\mathbb{R}^n$ is investigated. The existence of a pullback random attractor is…

Analysis of PDEs · Mathematics 2014-11-25 Hongyan Li , Yuncheng You

In this paper the Chua circuit with five linear elements and saturation non-linearity is studied. Numerical localization of self-excited attractor in the Chua circuit model can be done by computation of trajectory with initial data in a…

Chaotic Dynamics · Physics 2017-05-08 N. V. Kuznetsov , O. A. Kuznetsova , G. A. Leonov , T. N. Mokaev , N. V. Stankevich

Boolean networks constitute relevant mathematical models to study the behaviours of genetic and signalling networks. These networks define regulatory influences between molecular nodes, each being associated to a Boolean variable and a…

Discrete Mathematics · Computer Science 2025-06-24 José E. R. Cury , Patrícia Tenera Roxo , Vasco Manquinho , Claudine Chaouiya , Pedro T. Monteiro

There are few examples of non-autonomous vector fields exhibiting complex dynamics that may be proven analytically. We analyse a family of periodic perturbations of a weakly attracting robust heteroclinic network defined on the two-sphere.…

Dynamical Systems · Mathematics 2019-09-20 Isabel S. Labouriau , Alexandre A. P. Rodrigues

Random Boolean networks were introduced in 1969 by Kauffman as a model for gene regulation. By combining analytical arguments and efficient numerical simulations, we evaluate the properties of relevant components of critical random Boolean…

Disordered Systems and Neural Networks · Physics 2009-11-11 V. Kaufman , B. Drossel

Random boolean networks are a model of genetic regulatory networks that has proven able to describe experimental data in biology. They not only reproduce important phenomena in cell dynamics, but they are also extremely interesting from a…

Dynamical Systems · Mathematics 2015-02-26 Marco Villani , Davide Campioli , Chiara Damiani , Andrea Roli , Alessandro Filisetti , Roberto Serra

There are many tools for studying local dynamics. An important problem is how this information can be used to obtain global information. We present examples for which local stability does not carry on globally. To this purpose we construct,…

Dynamical Systems · Mathematics 2012-06-28 B. Alarcon , S. B. S. D. Castro , I. S. Labouriau

We study the dynamics of discrete-time regulatory networks on random digraphs. For this we define ensembles of deterministic orbits of random regulatory networks, and introduce some statistical indicators related to the long-term dynamics…

Dynamical Systems · Mathematics 2009-11-13 Anne Cros , Antonio Morante , Edgardo Ugalde

The understanding of Boolean automata networks dynamics takes an important place in various domains of computer science such as computability, complexity and discrete dynamical systems. In this paper, we make a step further in this…

Formal Languages and Automata Theory · Computer Science 2014-02-19 Tarek Melliti , Mathilde Noual , Damien Regnault , Sylvain Sené , Jérémy Sobieraj

We study an unusual but robust phenomenon that appears in an example system of four coupled phase oscillators. We show that the system can have a robust attractor that responds to a specific detuning between certain pairs of the oscillators…

Adaptation and Self-Organizing Systems · Physics 2009-11-10 O. Karabacak , P. Ashwin

The problem of constructing hazard-free Boolean circuits dates back to the 1940s and is an important problem in circuit design. Our main lower-bound result unconditionally shows the existence of functions whose circuit complexity is…

Computational Complexity · Computer Science 2021-01-01 Christian Ikenmeyer , Balagopal Komarath , Christoph Lenzen , Vladimir Lysikov , Andrey Mokhov , Karteek Sreenivasaiah

We investigate monotone circuits with local oracles [K., 2016], i.e., circuits containing additional inputs $y_i = y_i(\vec{x})$ that can perform unstructured computations on the input string $\vec{x}$. Let $\mu \in [0,1]$ be the locality…

Computational Complexity · Computer Science 2019-12-17 Jan Krajicek , Igor C. Oliveira

In this paper we prove the existence of the global attractor for the wave equation with nonlocal weak damping, nonlocal anti-damping and critical nonlinearity.

Analysis of PDEs · Mathematics 2022-05-09 Chunyan Zhao , Chengkui Zhong , Zhijun Tang

We show that the mean number of attractors in a critical Boolean network under asynchronous stochastic update grows like a power law and that the mean size of the attractors increases as a stretched exponential with the system size. This is…

Disordered Systems and Neural Networks · Physics 2007-05-23 Florian Greil , Barbara Drossel
‹ Prev 1 3 4 5 6 7 10 Next ›