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Disordered systems theory provides powerful tools to analyze the generic behaviors of highdimensional systems, such as species-rich ecological communities or neural networks. By assuming randomness in their interactions, universality…

Populations and Evolution · Quantitative Biology 2025-03-20 Juan Giral Martínez

Recent methodological advances are enabling better examination of speciation and extinction processes and patterns. A major open question is the origin of large discrepancies in species number between groups of the same age. Existing…

Populations and Evolution · Quantitative Biology 2015-09-01 Sacha Laurent , Marc Robinson-Rechavi , Nicolas Salamin

One of the first beings affected by changes in the climate are trees, one of our most vital resources. In this study tree species interaction and the response to climate in different ecological environments is observed by applying a joint…

Populations and Evolution · Quantitative Biology 2019-10-14 Hyun Choi , Ali Sadeghian , Sergio Marconi , Ethan White , Daisy Zhe Wang

Species growing in environments that change in time and space will vary in their abundance across locations, even in the absence of persistent location preferences. Here we quantify this non-equilibrium effect by studying a minimal model of…

Populations and Evolution · Quantitative Biology 2026-03-04 James F. D. Henderson , Andreas Tiffeau-Mayer

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants plays a key role in the…

Populations and Evolution · Quantitative Biology 2013-08-23 Samir Suweis , Filippo Simini , Jayanth R. Banavar , Amos Maritan

Accurately identifying spatial patterns of species distribution is crucial for scientific insight and societal benefit, aiding our understanding of species fluctuations. The increasing quantity and quality of ecological datasets present…

Individuals within any species exhibit differences in size, developmental state, or spatial location. These differences coupled with environmental fluctuations in demographic rates can have subtle effects on population persistence and…

Populations and Evolution · Quantitative Biology 2015-12-16 Gregory Roth , Sebastian J. Schreiber

Ecological networks such as plant-pollinator systems and food webs vary in space and time. This variability includes fluctuations in global network properties such as total number and intensity of interactions but also in the local…

Quantitative Methods · Quantitative Biology 2022-12-23 Tancredi Caruso , Giulio Virginio Clemente , Matthias C Rillig , Diego Garlaschelli

Qualitative interactions occur when a treatment effect or measure of association varies in sign by sub-population. Of particular interest in many biomedical settings are absence/presence qualitative interactions, which occur when an effect…

Methodology · Statistics 2020-10-20 Aaron Hudson , Ali Shojaie

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-18 Chengyi Tu , Samir Suweis , Jacopo Grillib , Marco Formentin , Amos Maritan

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-21 Chengyi Tu , Samir Suweis , Jacopo Grilli , Marco Formentin , Amos Maritan

The coexistence of multiple phytoplankton species despite their reliance on similar resources is often explained with mean-field models assuming mixed populations. In reality, observations of phytoplankton indicate spatial aggregation at…

Populations and Evolution · Quantitative Biology 2024-04-23 Coralie Picoche , William R. Young , Frédéric Barraquand

In human and animal groups, social interactions often rely on the transmission of information via visual observation of the behavior of others. These visual interactions are governed by the laws of physics and sensory limits. Individuals…

Biological Physics · Physics 2021-06-21 Winnie Poel , Claudia Winklmayr , Pawel Romanczuk

Interacting populations often create complicated spatiotemporal behavior, and understanding it is a basic problem in the dynamics of spatial systems. We study the two-species case by simulations of a host--parasitoid model. In the case of…

Populations and Evolution · Quantitative Biology 2009-01-16 Matti Peltomaki , Martin Rost , Mikko Alava

In order to model real ecological systems one has to consider many species that interact in complex ways. However, most of the recent theoretical studies have been restricted to few species systems with rather trivial interactions. The few…

Populations and Evolution · Quantitative Biology 2014-04-11 Shahir Mowlaei , Ahmed Roman , Michel Pleimling

Sensors are the key to environmental monitoring, which impart benefits to smart cities in many aspects, such as providing real-time air quality information to assist human decision-making. However, it is impractical to deploy massive…

Machine Learning · Computer Science 2024-04-24 Junfeng Hu , Yuxuan Liang , Zhencheng Fan , Li Liu , Yifang Yin , Roger Zimmermann

In social-ecological systems (SESs), social and biophysical dynamics interact within and between structural levels separated by spatial and temporal scales. Cross-scale interactions (CSIs) are interdependences between processes at different…

Physics and Society · Physics 2019-05-10 Andrew K. Ringsmuth , Steven J. Lade , Maja Schlüter

Understanding factors that shape biodiversity and species coexistence across scales is of utmost importance in ecology, both theoretically and for conservation policies. Species-area relationships (SARs), measuring how the number of…

Populations and Evolution · Quantitative Biology 2012-06-06 Massimo Cencini , Simone Pigolotti , Miguel A. Muñoz

We identify a mechanism for biological spatial pattern formation arising when the signals that mediate interactions between individuals in a population have pulsed character. Our general population-signal framework shows that while for a…

Populations and Evolution · Quantitative Biology 2023-08-15 Eduardo H. Colombo , Cristóbal López , Emilio Hernández-García

The far-reaching consequences of ecological interactions in the dynamics of biological communities remain an intriguing subject. For decades, competition has been a cornerstone in ecological processes, but mounting evidence shows that…

Populations and Evolution · Quantitative Biology 2021-07-19 F. Meloni , G. Nakamura , B. Grammaticos , A. S. Martinez , M. Badoual