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Mechanical interactions among cells in a growing microbial colony can significantly influence the colony's spatial genetic structure and, thus, evolutionary outcomes such as the fates of rare mutations. Here, we computationally investigate…

Soft Condensed Matter · Physics 2025-01-22 Mateusz Ratman , Jimmy Gonzalez Nuñez , Daniel A. Beller

Surface bubbles in the environment or engineering configurations, such as the ocean-atmosphere interface, sparkling wine, or during volcanic eruptions typically live on contaminated surfaces. A particularly common type of contamination is…

In nature, microorganisms must often cope with hostile environmental conditions. To do so they have developed sophisticated cooperative behavior and intricate communication capabilities, such as: direct cell-cell physical interactions via…

Condensed Matter · Physics 2007-05-23 Eshel Ben-Jacob , Inon Cohen , Ido Golding , Yonathan Kozlovsky

Fluid flow has a major effect on the aggregation and fragmentation of bacterial colonies. Yet, a generic framework to understand and predict how hydrodynamics affects colony size remains elusive. This study investigates how fluid flow…

Soft Condensed Matter · Physics 2026-04-21 Yuri Z. Sinzato , Robert Uittenbogaard , Petra M. Visser , Jef Huisman , Maziyar Jalaal

We model an enclosed system of bacteria, whose motility-induced phase separation is coupled to slow population dynamics. Without noise, the system shows both static phase separation and a limit cycle, in which a rising global population…

Statistical Mechanics · Physics 2017-11-08 Tobias Grafke , Michael E. Cates , Eric Vanden-Eijnden

Colonies of rod-shaped bacteria constitute a system of colloidal active matter with nematic properties. As a single initial bacterium multiplies through repeated divisions, the resulting colony quickly loses long-range orientational order,…

Complex fluids such as emulsions, colloidal gels, polymer or surfactant solutions are all characterized by the existence of a "microstructure" which may couple to an external flow on timescales that are easily probed in experiments. Such a…

Soft Condensed Matter · Physics 2015-02-11 Christophe Perge , Marc-Antoine Fardin , Sebastien Manneville

Bacterial colonies are a well-known example of living active matter, exhibiting collective behaviors such as nematic alignment and collective motion that play an important role in the spread of microbial infections. While the underlying…

A linear stability analysis of a two-layer plane Couette flow of two immiscible fluid layers with different densities, viscosities and thicknesses, bounded by two infinite parallel plates moving at a constant relative velocity to each…

Adaptation and Self-Organizing Systems · Physics 2019-02-20 Alexander F. Frenkel , David Halpern , Adam J. Schweiger

We investigate the influence of insoluble surfactants on the spatio-temporal evolution of breaking waves, focusing on both regular and spilling regimes. Three-dimensional direct numerical simulations are conducted using an…

Fluid Dynamics · Physics 2026-05-22 B. Wang , J. Chergui , S. Shin , D. Juric , C. R Constante-Amores

Bacteria on surfaces exhibit collective behaviors, such as active turbulence and active stresses, which result from their motility, growth, and interactions with their local surroundings. However, interfacial deformations on soft surfaces…

Soft Condensed Matter · Physics 2022-09-13 Vincent Hickl , Gabriel Juarez

In the present study we analytically investigate the deformation and bulk rheology of a dilute emulsion of surfactant-laden droplets suspended in a linear flow. We use an asymptotic approach to predict the effect of surfactant distribution…

Fluid Dynamics · Physics 2017-11-22 Shubhadeep Mandal , Sayan Das , Suman Chakraborty

Segregation of populations is a key question in evolution theory. One important aspect is the relation between spatial organization and the population's composition. Here we study a specific example -- sectors in expanding bacterial…

Condensed Matter · Physics 2009-10-31 Ido Golding , Inon Cohen , Eshel Ben-Jacob

We study the formation of propagating large-scale density waves of mixed polar-nematic symmetry in a colony of self-propelled agents that are bound to move along the planar surface of a thin viscous film. The agents act as an insoluble…

Fluid Dynamics · Physics 2025-09-08 Andrey Pototsky , Uwe Thiele

The spatial organization of bacteria in dense biofilms is key to their collective behaviour, and understanding it will be important for medical and technological applications. Here we study the morphology of a compact biofilm that undergoes…

Biological Physics · Physics 2019-03-05 Xin Wang , Howard A. Stone , Ramin Golestanian

The effect of surfactants on the tail and film dynamics of elongated gas bubbles propagating through circular capillary tubes is investigated by means of an extensive three-dimensional numerical study using a hybrid front-tracking/level-set…

In this paper we propose several models that describe the dynamics of liquid films which are covered by a high concentration layer of insoluble surfactant. First, we briefly review the 'classical' hydrodynamic form of the coupled evolution…

Fluid Dynamics · Physics 2013-03-25 Uwe Thiele , Andrew J. Archer , Mathis Plapp

Formation of bacterial colonies as biofilm on the surface/interface of various objects has the potential to impact not only human health and disease but also energy and environmental considerations. Biofilms can be regarded as soft…

Fluid Dynamics · Physics 2015-09-15 Pallab Barai , Aloke Kumar , Partha P. Mukherjee

During the spreading of epithelial tissues, the advancing tissue front often develops fingerlike protrusions. Their resemblance to traditional viscous fingering patterns in driven fluids suggests that epithelial fingers could arise from an…

Biological Physics · Physics 2019-03-05 Ricard Alert , Carles Blanch-Mercader , Jaume Casademunt

A horizontal flow of two immiscible fluid layers with different densities, viscosities and thicknesses, subject to vertical gravitational forces and with an insoluble surfactant present at the interface, is investigated. The base Couette…

Adaptation and Self-Organizing Systems · Physics 2017-10-11 Alexander L. Frenkel , David Halpern