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Inferring missing links or detecting spurious ones based on observed graphs, known as link prediction, is a long-standing challenge in graph data analysis. With the recent advances in deep learning, graph neural networks have been used for…

Social and Information Networks · Computer Science 2023-01-03 Xingping Xian , Tao Wu , Xiaoke Ma , Shaojie Qiao , Yabin Shao , Chao Wang , Lin Yuan , Yu Wu

The analysis of the interdependence between time series has become an important field of research in the last years, mainly as a result of advances in the characterization of dynamical systems from the signals they produce, the introduction…

Neurons and Cognition · Quantitative Biology 2013-05-28 Guiomar Niso , Ricardo Bruña , Ernesto Pereda , Ricardo Gutiérrez , Ricardo Bajo , Fernando Maestú , Francisco del-Pozo

Formulating optimization problems for industrial applications demands significant manual effort and domain expertise. While Large Language Models (LLMs) show promise in automating this process, evaluating their performance remains difficult…

Machine Learning · Computer Science 2025-11-03 Zhuohan Wang , Ziwei Zhu , Ziniu Li , Congliang Chen , Yizhou Han , Yufeng Lin , Zhihang Lin , Angyang Gu , Xinglin Hu , Ruoyu Sun , Tian Ding

GraphRAG integrates (knowledge) graphs with large language models (LLMs) to improve reasoning accuracy and contextual relevance. Despite its promising applications and strong relevance to multiple research communities, such as databases and…

Artificial Intelligence · Computer Science 2025-08-20 Yukun Cao , Zengyi Gao , Zhiyang Li , Xike Xie , S. Kevin Zhou , Jianliang Xu

Large Language Models (LLMs) excel at intuitive, implicit reasoning. Guiding LLMs to construct thought chains can enhance their deliberate reasoning abilities, but also faces challenges such as hallucination. Knowledge Graphs (KGs) can…

Computation and Language · Computer Science 2025-03-07 Guangyi Liu , Yongqi Zhang , Yong Li , Quanming Yao

Federated learning offers a privacy-preserving framework for recommendation systems by enabling local data processing; however, data localization introduces substantial obstacles. Traditional federated recommendation approaches treat each…

Machine Learning · Computer Science 2026-03-10 Xudong Wang , Qingbo Hao , Yingyuan Xiao

Graph-structured data underpins applications from citation analysis and social-network modeling to molecular design and knowledge-graph construction, and Large Language Models (LLMs) are increasingly used as prompt-driven graph…

Social and Information Networks · Computer Science 2026-05-20 Zihe Wei , Sheng Xiang , Ying Zhang , Changjun Jiang

A central question in neuroscience is how self-organizing dynamic interactions in the brain emerge on their relatively static structural backbone. Due to the complexity of spatial and temporal dependencies between different brain areas,…

Neurons and Cognition · Quantitative Biology 2020-10-15 Simon Wein , Wilhelm Malloni , Ana Maria Tomé , Sebastian M. Frank , Gina-Isabelle Henze , Stefan Wüst , Mark W. Greenlee , Elmar W. Lang

Recent research has explored the use of Large Language Models (LLMs) for tackling complex graph reasoning tasks. However, due to the intricacies of graph structures and the inherent limitations of LLMs in handling long text, current…

Artificial Intelligence · Computer Science 2025-11-26 Yuwei Hu , Runlin Lei , Xinyi Huang , Zhewei Wei , Yongchao Liu

How can we analyze enormous networks including the Web and social networks which have hundreds of billions of nodes and edges? Network analyses have been conducted by various graph mining methods including shortest path computation,…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-27 Chiwan Park , Ha-Myung Park , Minji Yoon , U Kang

Analyzing data from multiple neuroimaging studies has great potential in terms of increasing statistical power, enabling detection of effects of smaller magnitude than would be possible when analyzing each study separately and also allowing…

Measuring functional connectivity from fMRI is important in understanding processing in cortical networks. However, because brain's connection pattern is complex, currently used methods are prone to produce false connections. We introduce…

Neurons and Cognition · Quantitative Biology 2020-06-23 Tiger w. Lin , Giri P. Krishnan , Maxim Bazhenov , Terrence J. Sejnowski

Knowledge graphs provide structured and reliable information for many real-world applications, motivating increasing interest in combining large language models (LLMs) with graph-based retrieval to improve factual grounding. Recent…

Artificial Intelligence · Computer Science 2026-04-16 Yuchen Ying , Weiqi Jiang , Tongya Zheng , Yu Wang , Shunyu Liu , Kaixuan Chen , Mingli Song

Verifying the complex and multi-step reasoning of Large Language Models (LLMs) is a critical challenge, as holistic methods often overlook localized flaws. Step-by-step validation is a promising alternative, yet existing methods are often…

Artificial Intelligence · Computer Science 2025-11-25 Jiwei Fang , Bin Zhang , Changwei Wang , Jin Wan , Zhiwei Xu

Graph neural networks (GNNs) are powerful graph-based deep-learning models that have gained significant attention and demonstrated remarkable performance in various domains, including natural language processing, drug discovery, and…

Machine Learning · Computer Science 2023-06-06 Jaykumar Kakkad , Jaspal Jannu , Kartik Sharma , Charu Aggarwal , Sourav Medya

Functional Magnetic Resonance Imaging (fMRI) provides useful insights into the brain function both during task or rest. Representing fMRI data using correlation matrices is found to be a reliable method of analyzing the inherent…

Machine Learning · Computer Science 2025-01-29 Yicheng Leng , Syed Muhammad Anwar , Islem Rekik , Sen He , Eung-Joo Lee

Explainable recommendation has demonstrated significant advantages in informing users about the logic behind recommendations, thereby increasing system transparency, effectiveness, and trustworthiness. To provide personalized and…

Information Retrieval · Computer Science 2025-02-19 Yuhan Li , Xinni Zhang , Linhao Luo , Heng Chang , Yuxiang Ren , Irwin King , Jia Li

Real-world networks often benefit from capturing both local and global interactions. Inspired by multi-modal analysis in brain imaging, where structural and functional connectivity offer complementary views of network organization, we…

Neural and Evolutionary Computing · Computer Science 2025-08-11 Yang Li , Luopeiwen Yi , Tananun Songdechakraiwut

Large language models (LLMs) have demonstrated their strong capabilities in various domains, and have been recently integrated for graph analysis as graph language models (GLMs). With LLMs as the predictor, some GLMs can interpret unseen…

Computation and Language · Computer Science 2025-06-30 Junze Chen , Cheng Yang , Shujie Li , Zhiqiang Zhang , Yawen Li , Junping Du , Chuan Shi

Objective: Multi-modal functional magnetic resonance imaging (fMRI) can be used to make predictions about individual behavioral and cognitive traits based on brain connectivity networks. Methods: To take advantage of complementary…

Machine Learning · Computer Science 2024-08-27 Gang Qu , Li Xiao , Wenxing Hu , Kun Zhang , Vince D. Calhoun , Yu-Ping Wang