Related papers: A dynamical system of temperature-dependent sex li…
The study of density-dependent stochastic population processes is important from a historical perspective as well as from the perspective of a number of existing and emerging applications today. In more recent applications of these…
We study the time evolution of an atom suddenly coupled to a thermal radiation field. As a simplified model of the atom-electromagnetic field system we use a system composed by a harmonic oscillator linearly coupled to a scalar field in the…
This paper is a contribution to the understanding of the thermal properties of aging systems where statistically independent degrees of freedom with largely separated timescales are expected to coexist. Focusing on the prototypical case of…
We introduce an (evolution) algebra identifying the coefficients of inheritance of a bisexual population as the structure constants of the algebra. The basic properties of the algebra are studied. We prove that this algebra is commutative…
In the paper we prove a conjecture of U.A. Rozikov and R. Varro about globally attractiveness of a unique fixed point of the normalized evolution operator of a sex linked inheritance.
We study the constraints imposed on the population and phase relaxation rates by the physical requirement of completely positive evolution for open N-level systems. The Lindblad operators that govern the evolution of the system are…
Time evolution operator in quantum mechanics can be changed into a statistical operator by a Wick rotation. This strict relation between statistical mechanics and quantum evolution can reveal deep results when the thermodynamic limit is…
Game theoretic tools are utilized to analyze a one-locus continuous selection model of sex-specific meiotic drive by considering nonequivalence of the viabilities of reciprocal heterozygotes that might be noticed at an imprinted locus. The…
After an introduction to the general topic of models for a given locus of a diploid population whose quadratic dynamics is determined by a fitness landscape, we consider more specifically the models that can be treated using genetic (or…
Here we propose an evolutionary algorithm that self modifies its operators at the same time that candidate solutions are evolved. This tackles convergence and lack of diversity issues, leading to better solutions. Operators are represented…
We study the evolution of sexual and asexual populations in general fitness landscapes. We find deep relations between the mathematics of biological evolution and the formalism of quantum mechanics. We give the general structure of the…
In recent decades, cold atom experiments have become increasingly complex. While computers control most parameters, optimization is mostly done manually. This is a time-consuming task for a high-dimensional parameter space with unknown…
Although the cooperative dynamics emerging from a network of interacting players has been exhaustively investigated, it is not yet fully understood when and how network reciprocity drives cooperation transitions. In this work, we…
Recent experiments in adult mammalian tissues have found scaling relations of the voter model in the dynamics of the genetically labeled population of stem cells. Yet, the reason for this seemingly robust appearance of the voter model…
We investigate the dynamic evolution and thermodynamic process of a driven quantum system immersed in a finite-temperature heat bath. A Born-Markovian quantum master equation is formally derived for the time-dependent system with discrete…
We study the adaptation dynamics of an initially maladapted asexual population with genotypes represented by binary sequences of length $L$. The population evolves in a maximally rugged fitness landscape with a large number of local optima.…
We describe the simulation method of modelling the population evolution using Monte Carlo based on the Penna model. Individuals in the populations are represented by their diploid genomes. Genes expressed after the minimum reproduction age…
This paper investigates the evolution of a multi-locus biological system. The evolution of such a system is described by a quadratic stochastic operator (QSO) defined on a simplex. We demonstrate that this QSO can be decomposed into an…
In this paper we consider a population consisting of two species, dynamics of which is defined by a quadratic stochastic operator with variable coefficients, making it discontinuous operator at two points. This operator depends on three…
We propose a variational formulation for the nonequilibrium thermodynamics of discrete open systems, i.e., discrete systems which can exchange mass and heat with the exterior. Our approach is based on a general variational formulation for…