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We introduce the cosmological HYPER code based on an innovative hydro-particle-mesh (HPM) algorithm for efficient and rapid simulations of gas and dark matter. For the HPM algorithm, we update the approach of Gnedin & Hui (1998) to expand…

Cosmology and Nongalactic Astrophysics · Physics 2022-02-09 Yizhou He , Hy Trac , Nickolay Y. Gnedin

Fluid flow simulation is a highly active area with applications in a wide range of engineering problems and interactive systems. Meshless methods like the Moving Particle Semi-implicit (MPS) are a great alternative to deal efficiently with…

In the first part of a series of two papers, we present in considerable detail a collision-driven molecular dynamics algorithm for a system of nonspherical particles, within a parallelepiped simulation domain, under both periodic or…

Computational Physics · Physics 2007-05-23 Aleksandar Donev , Salvatore Torquato , Frank H. Stillinger

We present the Seismic Laboratory for Imaging and Modeling/Monitoring (SLIM) open-source software framework for computational geophysics and, more generally, inverse problems involving the wave-equation (e.g., seismic and medical…

We introduce $\texttt{A}$strophysical $\texttt{H}$ybrid-$\texttt{K}$inetic simulations with the $\texttt{flASH}$ code ($\texttt{AHKASH}$) -- a new Hybrid particle-in-cell (PIC) code developed within the framework of the multi-physics code…

Instrumentation and Methods for Astrophysics · Physics 2024-09-24 Radhika Achikanath Chirakkara , Christoph Federrath , Amit Seta

The Particle-In-Cell (PIC) method is a computational technique widely used in plasma physics to model plasmas at the kinetic level. In this work, we present our effort to prepare the semi-implicit energy-conserving PIC code ECsim for…

Hybrid codes are widely used to model ion-scale phenomena in space plasmas. Hybrid codes differ from full particle (PIC) codes in that the electrons are modeled as a fluid that is usually assumed to be massless, while the electric field is…

Plasma Physics · Physics 2022-04-05 D. Winske , Homa Karimabadi , Ari Le , N. Omidi , Vadim Roytershteyn , Adam Stanier

This study investigates the applicability of the semi-implicit particle-in-cell code FLEKS to heliospheric shock simulations. We examine one- and two-dimensional local planar shock simulations, initialized using MHD states with upstream…

Space Physics · Physics 2025-10-31 Hongyang Zhou , Yuxi Chen , Chuanfei Dong , Liang Wang , Ying Zou , Brian Walsh , Gábor Tóth

VPIC is a general purpose Particle-in-Cell simulation code for modeling plasma phenomena such as magnetic reconnection, fusion, solar weather, and laser-plasma interaction in three dimensions using large numbers of particles. VPIC's…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-16 Robert Bird , Nigel Tan , Scott V. Luedtke , Stephen Lien Harrell , Michela Taufer , Brian Albright

We present a simple and computationally efficient coarse-grained and solvent-free model for simulating lipid bilayer membranes. In order to be used in concert with particle-based reaction-diffusion simulations, the model is purely based on…

Biological Physics · Physics 2018-01-31 Mohsen Sadeghi , Thomas R. Weikl , Frank Noé

A brief review is presented of the scaling of complex fluids, polymers and polyelectrolytes in solution and in confined geometry, in thermodynamical, structural and rheology properties using equilibrium and nonequilibrium dissipative…

Soft Condensed Matter · Physics 2016-12-06 Armando Gama Goicochea

An implementation of the electromagnetic Particle in Cell loop in the code Smilei using task programming is presented. Through OpenMP, the macro-particles operations are formulated in terms of tasks. This formulation allows asynchronous…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-28 Francesco Massimo , Mathieu Lobet , Julien Derouillat , Arnaud Beck , Guillaume Bouchard , Mickael Grech , Frédéric Pérez , Tommaso Vinci

A lot of plasma physics problems are not amenable to exact solutions due to many reasons. It is worth mentioning among them, for example, nonlinearity of the motion equations, variable coefficients or non lineal conditions on known or…

Computational Physics · Physics 2018-12-11 Alex Estupiñán , E. A. Orozco , V. D. Dugar-Zhabon , M. T. Murillo Acevedo

Room-temperature metals and semi-metals which consist of a gas of bound electrons in a near-continuum band structure can be classified as cold quantum plasmas. This insight suggests that Particle-in-Cell (PIC) simulations, traditionally…

Plasma Physics · Physics 2025-01-14 Gregory K. Ngirmang , Hue T. B. Do , Guangxin Liu , Michel Bosman , Lin Wu

The implementation of a new particle module describing the physics of dust grains coupled to the gas via drag forces is the subject of this work. The proposed particle-gas hybrid scheme has been designed to work in Cartesian as well as in…

Earth and Planetary Astrophysics · Physics 2020-01-08 A. Mignone , M. Flock , B. Vaidya

Particle-in-Cell (PIC) methods have achieved widespread recognition as simple and flexible approaches to model collisionless plasma physics in fully kinetic simulations of astrophysical environments. However, in many situations the standard…

Heliospheric plasmas require multi-scale and multi-physics considerations. On one hand, MHD codes are widely used for global simulations of the solar-terrestrial environments, but do not provide the most elaborate physical description of…

Computational Physics · Physics 2020-12-09 S. P. Moschou , I. V. Sokolov , O. Cohen , G. Toth , J. J. Drake , Z. Huang , C. Garraffo , J. D. Alvarado-Gómez , T. Gombosi

This paper describes the main features of a pioneering unsteady solver for simulating ideal two-fluid plasmas on unstructured grids, taking profit of GPGPU (General-purpose computing on graphics processing units). The code, which has been…

We discuss the fundamentals of the implicit moment method for Particle In Cell (PIC) simulation as presently implemented in the CELESTE3D code. We present the method in its fully electromagnetic and fully kinetic version. The application of…

Computational Physics · Physics 2008-01-29 Giovanni Lapenta

Particle filters are a group of algorithms to solve inverse problems through statistical Bayesian methods when the model does not comply with the linear and Gaussian hypothesis. Particle filters are used in domains like data assimilation,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-10 Sebastian Friedemann , Kai Keller , Yen-Sen Lu , Bruno Raffin , Leonardo Bautista Gomez