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One of the fundamental problems within the field of machine learning is dimensionality reduction. Dimensionality reduction methods make it possible to combat the so-called curse of dimensionality, visualize high-dimensional data and, in…

Machine Learning · Computer Science 2025-05-12 Sergio García-Heredia , Ángela Fernández , Carlos M. Alaíz

Diffusion Map is a spectral dimensionality reduction technique which is able to uncover nonlinear submanifolds in high-dimensional data. And, it is increasingly applied across a wide range of scientific disciplines, such as biology,…

Machine Learning · Computer Science 2026-01-29 Sönke Beier , Paula Pirker-Díaz , Friedrich Pagenkopf , Karoline Wiesner

The Diffusion Map is a nonlinear dimensionality reduction technique used to analyze high-dimensional data, with recent applications extending to datasets from the social sciences. Previous research has given little attention to how the…

Physics and Society · Physics 2025-08-28 Sönke Beier

We introduce multi-frequency vector diffusion maps (MFVDM), a new framework for organizing and analyzing high dimensional datasets. The new method is a mathematical and algorithmic generalization of vector diffusion maps (VDM) and other…

Machine Learning · Computer Science 2019-06-07 Yifeng Fan , Zhizhen Zhao

We introduce the Linearized Diffusion Map (LDM), a novel linear dimensionality reduction method constructed via a linear approximation of the diffusion-map kernel. LDM integrates the geometric intuition of diffusion-based nonlinear methods…

Machine Learning · Computer Science 2025-07-22 Julio Candanedo

Diffusion maps (DMAP) are often used as a dimensionality-reduction tool, but more precisely they provide a spectral representation of the intrinsic geometry rather than a complete charting method. To illustrate this distinction, we study a…

Machine Learning · Computer Science 2026-03-31 Julio Candanedo , Alejandro Patiño

Diffusion maps are a nonlinear manifold learning technique based on harmonic analysis of a diffusion process over the data. Out-of-sample extensions with computational complexity $\mathcal{O}(N)$, where $N$ is the number of points…

Machine Learning · Statistics 2019-06-04 Andrew W. Long , Andrew L. Ferguson

Diffusion maps are a commonly used kernel-based method for manifold learning, which can reveal intrinsic structures in data and embed them in low dimensions. However, as with most kernel methods, its implementation requires a heavy…

Machine Learning · Computer Science 2019-12-03 Scott Gigante , Jay S. Stanley , Ngan Vu , David van Dijk , Kevin Moon , Guy Wolf , Smita Krishnaswamy

Data-dependent metrics are powerful tools for learning the underlying structure of high-dimensional data. This article develops and analyzes a data-dependent metric known as diffusion state distance (DSD), which compares points using a…

Machine Learning · Statistics 2020-03-10 Lenore Cowen , Kapil Devkota , Xiaozhe Hu , James M. Murphy , Kaiyi Wu

A graph embedding is a representation of graph vertices in a low-dimensional space, which approximately preserves properties such as distances between nodes. Vertex sequence-based embedding procedures use features extracted from linear…

Machine Learning · Computer Science 2020-01-22 Benedek Rozemberczki , Rik Sarkar

Map matching for sparse trajectories is a fundamental problem for many trajectory-based applications, e.g., traffic scheduling and traffic flow analysis. Existing methods for map matching are generally based on Hidden Markov Model (HMM) or…

Machine Learning · Computer Science 2026-01-14 Chenxu Han , Sean Bin Yang , Jilin Hu

Inspired by random walk on graphs, diffusion map (DM) is a class of unsupervised machine learning that offers automatic identification of low-dimensional data structure hidden in a high-dimensional dataset. In recent years, among its many…

Quantum Physics · Physics 2021-11-24 Apimuk Sornsaeng , Ninnat Dangniam , Pantita Palittapongarnpim , Thiparat Chotibut

We introduce a data-driven approach to building reduced dynamical models through manifold learning; the reduced latent space is discovered using Diffusion Maps (a manifold learning technique) on time series data. A second round of Diffusion…

Diffusion models excel at creating visually-convincing images, but they often struggle to meet subtle constraints inherent in the training data. Such constraints could be physics-based (e.g., satisfying a PDE), geometric (e.g., respecting…

Machine Learning · Computer Science 2025-04-11 Berthy T. Feng , Ricardo Baptista , Katherine L. Bouman

Textual network embedding leverages rich text information associated with the network to learn low-dimensional vectorial representations of vertices. Rather than using typical natural language processing (NLP) approaches, recent research…

Computation and Language · Computer Science 2019-01-15 Xinyuan Zhang , Yitong Li , Dinghan Shen , Lawrence Carin

Diffusion maps (DM) constitute a classic dimension reduction technique, for data lying on or close to a (relatively) low-dimensional manifold embedded in a much larger dimensional space. The DM procedure consists in constructing a spectral…

Machine Learning · Statistics 2022-03-08 Shan Shan , Ingrid Daubechies

Diffusion maps approximate the generator of Langevin dynamics from simulation data. They afford a means of identifying the slowly-evolving principal modes of high-dimensional molecular systems. When combined with a biasing mechanism,…

Data Analysis, Statistics and Probability · Physics 2020-07-01 Zofia Trstanova , Ben Leimkuhler , Tony Lelièvre

Due to network operation and maintenance relying heavily on network traffic monitoring, traffic matrix analysis has been one of the most crucial issues for network management related tasks. However, it is challenging to reliably obtain the…

Networking and Internet Architecture · Computer Science 2024-12-02 Xinyu Yuan , Yan Qiao , Zhenchun Wei , Zeyu Zhang , Minyue Li , Pei Zhao , Rongyao Hu , Wenjing Li

Graph Laplacians and related nonlinear mappings into low dimensional spaces have been shown to be powerful tools for organizing high dimensional data. Here we consider a data set X in which the graph associated with it changes depending on…

Classical Analysis and ODEs · Mathematics 2015-03-20 Ronald R. Coifman , Matthew J. Hirn

Diffusion models have been used in cosmological applications as a generative model for fast simulations and to reconstruct underlying cosmological fields or astrophysical images from noisy data. These two tasks are often treated as…

Cosmology and Nongalactic Astrophysics · Physics 2025-02-07 Supranta S. Boruah , Michael Jacob , Bhuvnesh Jain
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