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Time-series of persistence diagrams, known as vineyards, have shown to be useful in diverse applications. A natural algebraic version of vineyards is a time series of persistence modules equipped with interleaving maps between the…

Representation Theory · Mathematics 2023-07-13 Katharine Turner

Conformational transitions are ubiquitous in biomolecular systems, have significant functional roles and are subject to evolutionary pressures. Here we provide a first theoretical framework for topological transition, i.e. conformational…

Disordered Systems and Neural Networks · Physics 2015-09-02 Alireza Mashaghi , Abolfazl Ramezanpour

The stability of persistence diagrams is among the most important results in applied and computational topology. Most results in the literature phrase stability in terms of the bottleneck distance between diagrams and the $\infty$-norm of…

Algebraic Topology · Mathematics 2025-07-11 Primoz Skraba , Katharine Turner

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

Quantitative Methods · Quantitative Biology 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong

A general link between geometry and intermittency in passive scalar turbulence is established. Intermittency is qualitatively traced back to events where tracer particles stay for anomalousy long times in degenerate geometries characterized…

Chaotic Dynamics · Physics 2009-10-31 A. Celani , M. Vergassola

We use the persistent homology method of topological data analysis and dimensional analysis techniques to study data of syntactic structures of world languages. We analyze relations between syntactic parameters in terms of dimensionality,…

Computation and Language · Computer Science 2019-03-14 Alexander Port , Taelin Karidi , Matilde Marcolli

The thesis presents the subject of synthetic topology, especially with relation to metric spaces. A model of synthetic topology is a categorical model in which objects possess an intrinsic topology in a suitable sense, and all morphisms are…

General Topology · Mathematics 2021-04-22 Davorin Lešnik

The persistence theory has been employed by several authors in order to study persistence properties of dynamical systems generated by ordinary differential equations or maps across diverse disciplines. In this note, the author discusses a…

Dynamical Systems · Mathematics 2025-09-09 N. Pant

Multidimensional persistence modules do not admit a concise representation analogous to that provided by persistence diagrams for real-valued functions. However, there is no obstruction for multidimensional persistent Betti numbers to admit…

Dynamical Systems · Mathematics 2013-05-29 Andrea Cerri , Claudia Landi

We develop persistent homology in the setting of filtrations of (Cech) closure spaces. Examples of filtrations of closure spaces include metric spaces, weighted graphs, weighted directed graphs, and filtrations of topological spaces. We use…

Algebraic Topology · Mathematics 2025-02-19 Peter Bubenik , Nikola Milićević

One of the prime motivation for topology was Homotopy theory, which captures the general idea of a continuous transformation between two entities, which may be spaces or maps. In later decades, an algebraic formulation of topology was…

Category Theory · Mathematics 2025-11-24 Suddhasattwa Das

In this paper we describe a model based on persistent homology that describes interactions between mathematicians in terms of collaborations. Some ideas from classical data analysis are used.

Algebraic Topology · Mathematics 2014-03-24 Maria Bampasidou , Thanos Gentimis

While many approaches to make neural networks more fathomable have been proposed, they are restricted to interrogating the network with input data. Measures for characterizing and monitoring structural properties, however, have not been…

Machine Learning · Computer Science 2019-09-30 Bastian Rieck , Matteo Togninalli , Christian Bock , Michael Moor , Max Horn , Thomas Gumbsch , Karsten Borgwardt

Long-lived flow patterns in the atmosphere such as weather fronts, mid-latitude blockings or tropical cyclones often induce extreme weather conditions. As a consequence, their description, detection, and tracking has received increasing…

In [1], the authors have studied stability of certain causal properties of space-times in general relativity. As a continuation of this work, in the present paper, we review and discuss, some more aspects of stability which occur in various…

General Relativity and Quantum Cosmology · Physics 2017-09-14 R V Saraykar , Sujatha Janardhan

Topological data analysis is becoming increasingly relevant to support the analysis of unstructured data sets. A common assumption in data analysis is that the data set is a sample---not necessarily a uniform one---of some high-dimensional…

Algebraic Topology · Mathematics 2021-01-20 Bastian Rieck , Markus Banagl , Filip Sadlo , Heike Leitte

Persistent homology is a popular tool in Topological Data Analysis. It provides numerical characteristics of data sets which reflect global geometric properties. In order to be useful in practice, for example for feature generation in…

Computational Geometry · Computer Science 2020-02-17 Boris Goldfarb

We introduce local invariants of algebraic spaces and stacks which measure how far they are from being a scheme. Using these invariants, we develop mostly topological criteria to determine when the moduli space of a stack is a scheme. As an…

Algebraic Geometry · Mathematics 2024-11-12 Andres Fernandez Herrero , Dario Weißmann , Xucheng Zhang

Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár

This note is about invariants of moduli spaces of curves. It includes their intersection theory and cohomology. Our main focus in on the distinguished piece containing the so called tautological classes. These are the most natural classes…

Algebraic Geometry · Mathematics 2016-11-01 Mehdi Tavakol
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