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Negotiation diagrams are a model of concurrent computation akin to workflow Petri nets. Deterministic negotiation diagrams, equivalent to the much studied and used free-choice workflow Petri nets, are surprisingly amenable to verification.…

Logic in Computer Science · Computer Science 2017-04-14 Javier Esparza , Anca Muscholl , Igor Walukiewicz

Building upon [1], this study aims to introduce fractal geometry into graph theory, and to establish a potential theoretical foundation for complex networks. Specifically, we employ the method of substitution to create and explore…

Dynamical Systems · Mathematics 2024-05-29 Nero Ziyu Li

We give a definition of $\mathsf{Q}$-net, a generalization of Petri nets based on a Lawvere theory $\mathsf{Q}$, for which many existing variants of Petri nets are a special case. This definition is functorial with respect to change in…

Category Theory · Mathematics 2020-11-25 Jade Master

The graph reconstruction conjecture asserts that every simple graph on at least three vertices is uniquely determined by its deck of vertex-deleted subgraphs. In this expository article we survey the conjecture and present an…

Combinatorics · Mathematics 2026-04-21 Emilie Dufresne , Gabriela Jeronimo , Jenny Kenkel , Haydee Lindo , Nelly Villamizar

In Knowledge Graphs (KGs), where the schema of the data is usually defined by particular ontologies, reasoning is a necessity to perform a range of tasks, such as retrieval of information, question answering, and the derivation of new…

Artificial Intelligence · Computer Science 2025-02-27 Anastasios Nentidis , Charilaos Akasiadis , Angelos Charalambidis , Alexander Artikis

Graphical models have demonstrated their exceptional capabilities across numerous applications. However, their performance, confidence, and trustworthiness are often limited by the inherent randomness in data generation and the lack of…

Machine Learning · Computer Science 2026-04-15 Chao Chen , Chenghua Guo , Rui Xu , Jiujiu Chen , Xiangwen Liao , Xi Zhang , Sihong Xie , Hui Xiong , Philip Yu

Graph Networks are used to make decisions in potentially complex scenarios but it is usually not obvious how or why they made them. In this work, we study the explainability of Graph Network decisions using two main classes of techniques,…

Machine Learning · Computer Science 2019-06-03 Federico Baldassarre , Hossein Azizpour

We study in this paper the structure of solutions in the random hypergraph coloring problem and the phase transitions they undergo when the density of constraints is varied. Hypergraph coloring is a constraint satisfaction problem where…

Disordered Systems and Neural Networks · Physics 2018-02-19 Marylou Gabrié , Varsha Dani , Guilhem Semerjian , Lenka Zdeborová

This work deals with the challenge of learning and reasoning over multi-hop question answering (QA). We propose a graph reasoning network based on the semantic structure of the sentences to learn cross paragraph reasoning paths and find the…

Computation and Language · Computer Science 2020-11-19 Chen Zheng , Parisa Kordjamshidi

We present an approach to the solution of decision problems formulated as influence diagrams. This approach involves a special triangulation of the underlying graph, the construction of a junction tree with special properties, and a message…

Artificial Intelligence · Computer Science 2013-02-28 Frank Jensen , Finn Verner Jensen , Soren L. Dittmer

We propose a novel method for automatic reasoning on knowledge graphs based on debate dynamics. The main idea is to frame the task of triple classification as a debate game between two reinforcement learning agents which extract arguments…

Using the dynamics of information propagation on a network as our illustrative example, we present and discuss a systematic approach to quantifying heterogeneity and its propagation that borrows established tools from Uncertainty…

Adaptation and Self-Organizing Systems · Physics 2015-11-25 Karthikeyan Rajendran , Andreas C. Tsoumanis , Constantinos I. Siettos , Carlo R. Laing , Ioannis G. Kevrekidis

Given a graph G=(V, E), a vertex is said to ve-dominate an edge if it is either incident with the edge or adjacent to one of its endpoints. A set of vertices is a ve-dominating set if it ve-dominates every edge of the graph. We introduce…

Combinatorics · Mathematics 2025-12-16 Yasemin Büyükçolak

The language of graph theory, or network science, has proven to be an exceptional tool for addressing myriad problems in neuroscience. Yet, the use of networks is predicated on a critical simplifying assumption: that the quintessential unit…

Neurons and Cognition · Quantitative Biology 2016-01-14 Chad Giusti , Robert Ghrist , Danielle S. Bassett

Orthologous genes, which arise through speciation, play a key role in comparative genomics and functional inference. In particular, graph-based methods allow for the inference of orthology estimates without prior knowledge of the underlying…

Populations and Evolution · Quantitative Biology 2025-02-14 Anna Lindeberg , Guillaume E. Scholz , Nicolas Wieseke , Marc Hellmuth

Sampling algorithms, hypergraph degree sequences, and polytopes play a crucial role in statistical analysis of network data. This article offers a brief overview of open problems in this area of discrete mathematics from the point of view…

Discrete Mathematics · Computer Science 2016-01-11 Sonja Petrović

Given a graph G, we investigate the question of determining the parity of the number of homomorphisms from G to some other fixed graph H. We conjecture that this problem exhibits a complexity dichotomy, such that all parity graph…

Computational Complexity · Computer Science 2013-09-17 John Faben , Mark Jerrum

Entanglement is a complexity measure of digraphs that origins in fixed-point logics. Its combinatorial purpose is to measure the nested depth of cycles in digraphs. We address the problem of characterizing the structure of graphs of…

Computer Science and Game Theory · Computer Science 2009-04-13 Walid Belkhir

We prove that $\omega$-languages of (non-deterministic) Petri nets and $\omega$-languages of (non-deterministic) Turing machines have the same topological complexity: the Borel and Wadge hierarchies of the class of $\omega$-languages of…

Formal Languages and Automata Theory · Computer Science 2023-06-22 Olivier Finkel , Michał Skrzypczak

A set S of vertices in a graph G is a dominating set of G if every vertex not in S is adjacent to a vertex in S . The domination number of G, denoted by $\gamma$(G), is the minimum cardinality of a dominating set in G. In a breakthrough…

Discrete Mathematics · Computer Science 2024-10-07 Paul Dorbec , Michael Antony Henning
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